Protein

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Genbank accession
YP_010660157.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFESLKNQHGTRLIQAVAIYPNACKYSTDEALANGECVASADYSDSYTGNITVSGGDLTFFGASSNSYLRIGDEIAKCTVVNSTTVNITARAQLGTTAEAITTSDSLRVVHGGEADGSCRGYPKRPDGKGCSNDDSFDRDINREFLITDTQLVSGEIYYNGLNSISHNPVILKPAEAMAKNASVTVSITDNEDGDQYSVPYPSQRNSNSTYLRKLIARTGGYLRNRKMIVYSGFTEGSSFDPVNCISREYIIDNFNIGKGDRVTIIGKDPLMLAEETKAKTHDVSAGVLLADVTNASTQITLKNFAVGEYGNDTDTGTAIIDNELIDYTVNNSVLGILDINARAVAGSEQKDHKINASVQKCLVLTDFNPVQAIIDRLQARTSIEPRFYDDYTGVIATIPSSTGTAYVTKPESLKDFNNTLIQSWAENNISMYFDELAKKIKIKAVGDFSQQPVTLTDDDIILDSIEIKNKYDDQITRASIGFAPFDASKKTNEENSSIIFQSINLDVELSGTLEPQEAKTFYSKFLTDSDNDVSIAVGGVSRIANVNKKPPQEYSFMLDYEEYGSVSGGVVEEGEIINVTTELSIDDDGQPLSQNLQILSIKDDMEEKKIKVTAVTYQDLINEDDFDFIIDESKEDYVLSNDFAPPAGDYTIFIASNVTIGSTSTANFAFDTGTQASGVTFTIINRGQILAAGGDGADGRPALAPDPDDFPSRFESVSDAGFDGGDALNITVPTVIDITQGVIYSGGGGVPSGISIADSTASPVYVEGGNGGSGGQGYVGGNGGAAGVAEVENTATDTGINGADGSRGGAGSLGGLSGGAWGEDGQTDENLAAGGEAGFAIKSNGNSVTLIGDNEATIRGKRDF
Physico‐chemical
properties
protein length:866 AA
molecular weight: 91961,95660 Da
isoelectric point:4,31899
aromaticity:0,07506
hydropathy:-0,29134

Domains

Domains [InterPro]
DC_2014
ATT
18–121
DC_2014 IPR007932
DC_1555
ATT
105–629
DC_1555
YP_010660157.1
1 866
Architecture
ATT
RBD
ATT 18-629 | RBD 649-863 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010660157.1
1 866
Domain Start End Length (AA) Confidence
N-terminal 1 93 93 0,3772
Central domain 94 292 200 0,1319
C-terminal 293 866 573 0,2083
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-93
Central
94-292
C-terminal
293-866

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage HS5
[NCBI] 		1357709 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp.
[NCBI] 		53249 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010660157.1 [NCBI]
Genbank nucleotide accession
NC_070825.1 [NCBI]
CDS location
range 34608 -> 37208
strand +
CDS
ATGTCATTTGAAAGCCTAAAAAATCAACATGGTACGCGATTAATTCAAGCCGTGGCGATATACCCAAACGCGTGCAAATACTCCACTGATGAGGCTTTGGCAAATGGTGAGTGCGTTGCTAGCGCTGATTACAGTGATTCATACACTGGCAATATAACCGTTAGCGGTGGAGATTTAACATTCTTCGGCGCTTCATCTAACTCTTATTTACGAATAGGTGATGAGATAGCTAAATGCACAGTGGTTAATTCAACAACTGTTAATATAACGGCTAGAGCGCAATTAGGCACTACTGCCGAGGCTATAACAACTAGTGATAGTTTAAGGGTTGTTCATGGCGGCGAAGCTGATGGCTCTTGTCGAGGATACCCAAAAAGGCCAGATGGTAAAGGCTGCTCAAACGATGATAGTTTTGACCGTGACATTAATCGTGAGTTTTTAATAACTGACACTCAACTTGTATCTGGTGAAATTTATTATAACGGGCTTAACAGTATTAGCCACAATCCCGTCATTCTAAAGCCAGCCGAGGCAATGGCTAAAAACGCAAGTGTTACTGTCAGCATTACAGATAATGAAGATGGTGATCAATATTCTGTACCTTACCCATCTCAGCGCAATAGCAACTCAACATACCTTAGAAAGTTAATAGCTCGCACTGGCGGGTATTTGAGGAATAGAAAGATGATTGTTTATTCTGGATTCACAGAGGGCAGCTCTTTCGACCCAGTAAATTGCATATCGCGTGAATACATTATTGATAATTTCAATATAGGAAAAGGCGATCGGGTAACTATAATTGGCAAAGACCCACTAATGCTGGCAGAAGAAACCAAAGCAAAAACTCACGACGTAAGCGCAGGGGTTTTGCTTGCTGATGTGACAAATGCGTCAACACAGATAACACTAAAAAACTTTGCTGTAGGCGAGTACGGTAATGATACTGATACTGGCACTGCAATAATTGATAATGAGCTGATTGATTACACTGTAAACAACTCAGTGCTTGGCATTCTTGATATTAATGCACGCGCGGTAGCTGGTAGTGAGCAAAAAGACCACAAAATTAACGCATCTGTTCAAAAGTGCCTAGTGCTAACTGACTTTAACCCGGTTCAAGCTATTATTGACAGACTGCAAGCTAGAACGTCAATTGAGCCTCGTTTTTATGACGACTACACTGGTGTTATAGCAACAATACCAAGCAGCACAGGCACGGCTTATGTAACTAAACCCGAGAGCTTAAAGGATTTTAATAACACGCTGATACAATCTTGGGCTGAAAACAATATAAGCATGTACTTCGATGAACTAGCAAAGAAAATTAAAATCAAAGCGGTAGGAGACTTTTCACAGCAACCAGTGACGTTAACTGATGACGATATAATCTTAGATAGCATTGAGATAAAGAATAAATATGACGATCAAATAACTCGCGCATCAATAGGCTTTGCTCCTTTTGACGCAAGCAAGAAAACCAATGAGGAAAACAGCTCGATTATATTTCAATCTATAAATCTTGATGTTGAATTGAGTGGCACGCTTGAGCCTCAAGAAGCAAAAACATTCTACTCCAAGTTTTTAACTGATAGCGATAATGATGTAAGTATTGCAGTAGGCGGTGTATCGCGCATTGCAAATGTAAATAAAAAACCACCTCAAGAATATAGCTTTATGCTTGACTATGAGGAGTACGGCTCAGTTAGCGGTGGGGTTGTTGAAGAAGGTGAAATAATAAACGTTACAACGGAGCTTTCAATTGATGATGATGGCCAGCCTCTATCGCAAAACCTGCAAATACTCAGCATTAAAGACGACATGGAAGAGAAGAAAATAAAGGTCACTGCGGTCACTTATCAAGACTTGATAAACGAAGATGACTTTGACTTCATTATCGATGAAAGCAAAGAAGATTACGTGTTAAGTAATGACTTCGCGCCGCCTGCTGGTGATTACACTATATTTATAGCGTCAAACGTGACAATCGGTTCAACATCAACAGCAAACTTTGCTTTTGATACTGGCACACAGGCAAGCGGCGTTACATTTACTATAATCAATAGGGGTCAAATACTTGCGGCTGGCGGTGATGGCGCAGATGGCCGTCCTGCTTTAGCTCCAGACCCTGATGATTTCCCGTCTCGCTTTGAGTCAGTAAGTGATGCTGGCTTTGACGGCGGTGACGCTTTGAATATAACAGTACCGACAGTTATAGACATTACACAGGGCGTTATATACTCAGGTGGTGGTGGTGTACCAAGCGGCATTAGCATTGCTGACAGCACAGCATCACCAGTTTACGTTGAAGGCGGCAATGGTGGGTCAGGCGGTCAGGGTTATGTGGGTGGTAACGGTGGAGCTGCTGGGGTTGCGGAAGTTGAAAACACAGCAACGGACACGGGTATTAATGGCGCTGACGGGTCAAGGGGTGGCGCTGGTTCGCTTGGTGGGTTAAGTGGTGGTGCATGGGGCGAAGATGGTCAAACTGACGAAAACCTAGCGGCTGGCGGTGAAGCTGGCTTTGCTATAAAATCTAACGGTAACAGCGTTACGCTTATCGGCGATAACGAAGCAACAATACGCGGAAAGAGAGATTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7fc322e60db98eb98aa0064f916ff7a090b3fd7c10ea019e2c53c54d8a78438b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudoalteromonas phage genomics Duhaime,M.B. and Sullivan,M.B. 2010-07-08 — GenBank