Protein
View in Explore- Genbank accession
- WLY86214.1 [GenBank]
- Protein name
- long-tail fiber protein
- RBP type
-
TFTSPTSP
- Protein sequence
-
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTVGSSQQCGVYPGNGDAATFDMANIDIVSWNGIGFKSSQGSADRTVVINARTGDISTKGGFYAIGPVRSNATAPVAANDLTRKDYVDGRINIVTDNTNSRVLRSGDTMIGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
- Physico‐chemical
properties -
protein length: 220 AA molecular weight: 23420,63500 Da isoelectric point: 5,85649 aromaticity: 0,10000 hydropathy: -0,29818
Domains
Domains [InterPro]
DC_0466
STR
1–218
STR
1–218
IPR005601
STR
56–194
STR
56–194
1
220
Architecture
STR 1-218 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
220
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 32 | 32 | 0,9709 |
| Central domain | 33 | 209 | 178 | 0,1113 |
| C-terminal | 210 | 220 | 10 | 0,9230 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-32
1-32
Central
33-209
33-209
C-terminal
210-220
210-220
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage 308Ecol101PP [NCBI] |
3070623 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Escherichia coli [NCBI] |
562 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WLY86214.1
[NCBI]
Genbank nucleotide accession
OR062945.1
[NCBI]
CDS location
range 158103 -> 158765
strand -
strand -
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCCGTTATATGGCATCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACTTACGCTGCAACTGTTCGATTTAATGGAGGCGTACATGTTCCTACTGTAGGTAGTAGTCAACAGTGTGGTGTTTATCCAGGTAACGGTGATGCAGCTACTTTTGATATGGCAAATATTGACATCGTTTCGTGGAATGGTATTGGTTTTAAGTCATCACAAGGTTCAGCAGACCGAACTGTTGTTATTAACGCTCGTACCGGTGATATCAGCACTAAGGGCGGTTTTTATGCAATTGGTCCTGTCCGTTCTAACGCTACTGCTCCGGTTGCAGCAAATGATCTCACACGAAAAGATTATGTTGATGGACGAATAAATATTGTTACGGATAACACAAATTCCCGTGTATTGCGTTCTGGCGATACCATGATTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
156707e4a3346440d6beb9eb413c38f9c584d0bbed8deef164f05fd3840f45ce
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50