Protein

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Genbank accession
YP_009842085.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKYYFADRKSNILGVGSTDGKGEWRIDNDIETQSVDNRPAVELSLDIHFTTDQEQAVNEMAKATNFIMYQDEEGNAHQMVIESVDHDSLGHIHSIVASDAGNDLINETVGAFKADKPYTIADYITRFTNDSGWEIGINEFPDNVRTLEWTSEESSLARIIAVAKDFDAVLSFGFEFVGTNLVKRVINIRHETAGDSLISFEMNKDINNIVTHLDTYDMETSIKAYGAVPESTDGSTNQDPINLIGYNWTDPTGQFVLDQYGFLHDTIAVQKYSRLLSNSNPNPKQSDWNRVKTFDSKSQAELLQAALADLKKYNHPNETYDIDLVNSPYVPLNQTVHIADENQQLFLSAKVLSIQRSRANHSVKLTLGEFAHETVSFDQRLSELANQMSNISKTVQYYPWIRYADDDKGTNMSALPAGKKYMAIVWSNETSVPSDNPADYAGHWALIQGKDGVDGVPGAKGADGRTSYFHTAWADDVSGQSGFTVSSGDGKKYIGTYSDFTLADSTNPDDYNWALFKGEDGDVGPKGDEGLPGKPGADGRTAYAHFAYANSQDGQTDFSTTAPNRKYIGFYSDFTSGDSTNPSDYNWSLIKGADGADGKDGVPGKPGADGKTPYFHIAYADSSDGRTNFSLDTPGSRKYIGSYTDFTQADSTNPALYSWQLVQGPKGDTGPQGPQGPQGPRGPQGVPGSKDVPYPYVQLSAPVSPKKGDTWWHGTSYADATALQLYDGTKWIDQSIAQAVLSIKKLQSIEIDTSTINSPDINSPFSHVQIDGAKSSGNLELKDASLSILGNIEDNNGNPNGQYYKSLLSPNGMFNYITTPDRKGSVSSVALQRGALQLQTLISDPSAATKKYIQSEFKSTDNVTFFYVNTTALSNIDIDWAYIYYTRRGNLVTANFQIHTIANQYNFLRLADIRPGYKPYLTNKIVASCLSFSDPGQSTAMYSSTPSGGTVGWYSNISKASGSYGGSVSYLTQDDYPTGDSYFA
Physico‐chemical
properties
protein length:984 AA
molecular weight: 107743,86870 Da
isoelectric point:4,77853
aromaticity:0,10874
hydropathy:-0,55163

Domains

Domains [InterPro]
DC_0266
STR
1–909
DC_0266
IPR010572
ENZ
124–371
IPR010572 PTHR24637
G3DSA:1.20.5.320
STR
662–712
G3DSA:1.20.5.320
YP_009842085.1
1 984
Architecture
STR
STR 1-909 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009842085.1
1 984
Domain Start End Length (AA) Confidence
N-terminal 1 874 874 0,9721
Central domain 875 973 100 0,2379
C-terminal 974 984 10 0,5323
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-874
Central
875-973
C-terminal
974-984

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage BH1
[NCBI] 		1932007 Uroviricota > Caudoviricetes > Behunavirus >
Host Lacticaseibacillus rhamnosus
[NCBI] 		47715 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009842085.1 [NCBI]
Genbank nucleotide accession
NC_048737.1 [NCBI]
CDS location
range 15352 -> 18306
strand +
CDS
ATGAAGTATTATTTTGCAGATCGAAAATCAAACATTTTGGGTGTTGGGTCGACTGATGGCAAAGGCGAATGGCGAATTGACAACGATATAGAAACGCAAAGTGTTGACAATCGTCCTGCGGTCGAGCTTTCTCTTGATATTCACTTCACGACTGATCAGGAACAAGCAGTCAATGAGATGGCTAAAGCAACCAACTTCATCATGTATCAAGATGAAGAAGGCAACGCTCACCAAATGGTGATTGAATCGGTTGACCATGATTCACTAGGCCACATTCACTCAATTGTTGCCAGCGATGCTGGTAATGATTTAATTAACGAAACTGTTGGCGCCTTCAAGGCCGACAAGCCATATACCATCGCTGACTACATCACAAGGTTTACAAATGATTCTGGCTGGGAGATTGGCATCAACGAATTTCCTGACAATGTTCGAACACTCGAGTGGACTAGTGAAGAATCATCGTTGGCTCGCATTATTGCCGTGGCAAAAGATTTTGATGCAGTGCTTAGTTTTGGCTTTGAGTTTGTTGGAACCAACTTGGTTAAGCGTGTCATTAACATTCGGCATGAAACGGCCGGTGACAGCTTGATTTCCTTTGAAATGAATAAGGACATCAACAATATCGTCACGCATCTCGATACCTATGACATGGAAACATCTATCAAGGCTTATGGAGCGGTGCCAGAAAGCACGGATGGATCAACTAATCAGGACCCAATCAACTTGATCGGCTACAACTGGACTGATCCAACGGGACAGTTTGTGCTTGATCAGTACGGGTTCTTGCACGATACCATTGCTGTGCAGAAATATTCACGTTTGTTAAGCAACAGCAACCCAAACCCAAAACAGTCTGACTGGAATCGGGTTAAAACGTTTGATTCAAAATCGCAGGCAGAACTTTTGCAAGCGGCTTTGGCAGATTTGAAGAAATACAATCATCCAAACGAAACGTATGATATCGATTTGGTTAATTCACCATATGTGCCGTTGAATCAAACGGTCCACATTGCCGATGAGAATCAACAGCTATTCCTGTCTGCCAAAGTGTTGAGCATTCAGCGCAGCCGTGCTAACCATTCTGTCAAGCTTACTTTGGGTGAGTTCGCTCATGAAACAGTCAGCTTTGACCAACGACTCAGTGAGCTTGCCAACCAGATGTCGAATATCTCAAAAACCGTTCAATACTATCCATGGATTCGTTATGCCGATGATGACAAAGGCACTAACATGTCAGCGTTACCTGCTGGCAAGAAGTACATGGCAATTGTTTGGTCAAATGAGACATCCGTTCCAAGTGACAATCCAGCTGATTACGCTGGCCATTGGGCGCTTATTCAGGGCAAAGATGGTGTTGACGGTGTTCCGGGTGCAAAAGGTGCTGATGGCCGTACAAGCTATTTTCACACTGCTTGGGCAGATGATGTAAGTGGCCAAAGTGGGTTCACGGTATCCAGTGGCGATGGCAAAAAGTATATTGGCACGTACAGTGACTTCACACTTGCTGACAGCACCAATCCGGATGATTACAACTGGGCACTTTTTAAGGGCGAGGACGGTGACGTTGGACCCAAAGGTGATGAAGGATTGCCAGGGAAACCGGGTGCTGATGGTCGTACTGCTTATGCCCACTTTGCTTACGCAAACAGCCAAGACGGCCAGACCGACTTTTCAACTACTGCCCCTAACCGCAAGTACATTGGCTTCTACAGCGACTTCACATCTGGCGATAGTACGAATCCAAGCGACTATAACTGGTCGCTGATCAAAGGTGCAGACGGTGCGGATGGTAAAGATGGGGTGCCAGGGAAACCGGGTGCTGATGGCAAGACACCGTACTTCCATATCGCATACGCCGATAGCAGTGATGGTAGAACGAACTTTTCGCTGGATACTCCGGGTTCTCGTAAGTACATTGGTAGTTATACAGACTTTACACAGGCAGATAGCACGAATCCAGCACTTTATTCTTGGCAACTAGTGCAGGGGCCAAAAGGTGATACTGGACCACAAGGACCGCAAGGGCCTCAAGGACCACGAGGTCCGCAAGGTGTTCCCGGAAGCAAGGATGTGCCTTATCCATATGTACAATTGTCGGCCCCAGTAAGCCCGAAAAAAGGTGATACTTGGTGGCATGGCACTAGCTACGCCGATGCTACGGCTTTGCAACTATATGATGGTACCAAATGGATTGACCAGAGTATTGCCCAGGCGGTTCTCAGTATCAAAAAGCTGCAATCAATTGAGATTGACACATCAACCATCAATTCGCCTGACATTAATTCACCATTCAGCCATGTTCAGATTGACGGTGCCAAGAGTTCTGGCAATCTTGAACTCAAAGATGCAAGTCTAAGTATATTGGGCAACATCGAAGACAATAATGGTAATCCCAACGGTCAATACTACAAATCACTTTTGAGCCCAAATGGAATGTTCAACTACATCACGACACCCGATCGAAAGGGGAGCGTGTCGTCAGTTGCACTCCAACGTGGTGCACTTCAGTTACAAACATTGATCAGCGACCCCAGTGCCGCTACAAAAAAATATATTCAGTCTGAATTCAAATCAACAGACAACGTGACATTTTTCTACGTCAATACAACCGCGCTAAGCAATATTGATATTGATTGGGCATATATTTACTACACAAGACGTGGCAATTTGGTGACCGCCAACTTTCAAATTCACACAATAGCTAATCAGTACAATTTCTTGAGGCTCGCAGATATTAGACCCGGTTACAAGCCTTATTTGACAAACAAGATTGTTGCAAGCTGCTTGAGCTTTTCAGATCCCGGACAATCTACCGCTATGTATTCAAGTACGCCAAGCGGAGGAACGGTCGGCTGGTATAGCAACATTTCCAAAGCTTCTGGTAGTTATGGTGGCTCGGTGTCGTATCTAACTCAGGACGATTATCCGACGGGTGATTCATATTTTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b6ee1e0f110b0af9c852728ba3f85e60a16b1ba3f11c2798423c7df1da36a92
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular characterization of bacteriophage BH1 orginated from probiotic Lactobacillus rhamnosus Pen Jarocki,P., Podlesny,M., Komon-Janczara,E., Kholiavskyi,O. and Targonski,Z. 2019-12-16 — GenBank