Protein

View in Explore
Genbank accession
YP_010672509.1 [GenBank]
Protein name
collar domain containing protein/baseplate wedge protein
RBP type
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSIESAKYINNLDVELPKPKDLIREGDDHIRLIKEVLKNTLQGFNSAVTVTSDKLNQFDKTFVYENEVLVSNSDIKMGAKKVFDAGGNRIKGVADPTEDGDAIPFKYGRETFQGNAWPVGSIYMTMSNADITTIFKFGKWERFATGRMIVSAGAGVDVNGTTKVFGLGELGGEYTHAIKEAEIPSHVHSSGGLSTNVAGEHTHTFKQLDIRGPGPDTKHGFPIAQMSMANFTTAAAGGHQHMIIGNTGATGGSVAMSMMPTYVAVNMWRRTE
Physico‐chemical
properties
protein length:272 AA
molecular weight: 29433,95680 Da
isoelectric point:6,31120
aromaticity:0,08088
hydropathy:-0,29632

Domains

Domains [InterPro]
DC_0383
STR
6–272
DC_0383
IPR053827
ATT
116–271
IPR053827
SSF88874
STR
146–270
SSF88874
YP_010672509.1
1 272
Architecture
STR
ATT
STR 6-115 | ATT 116-272
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage BUCT695
[NCBI] 		2908630 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010672509.1 [NCBI]
Genbank nucleotide accession
NC_070977 [NCBI]
CDS location
range 68700 -> 69518
strand -
CDS
ATGTCTATTGAAAGTGCAAAGTATATTAACAACTTGGATGTGGAACTTCCAAAACCAAAGGATCTAATCCGAGAAGGTGATGACCACATCCGATTGATTAAAGAGGTGTTGAAAAATACACTACAAGGCTTCAACTCCGCTGTTACTGTGACAAGTGATAAGTTGAATCAATTCGATAAAACATTTGTTTATGAGAACGAAGTTCTGGTGTCCAACTCTGATATTAAGATGGGTGCTAAGAAAGTGTTTGATGCTGGTGGTAACCGTATCAAAGGTGTTGCTGATCCAACTGAAGATGGGGATGCTATCCCCTTCAAGTATGGTAGAGAAACTTTTCAAGGTAATGCTTGGCCTGTAGGTTCTATCTACATGACAATGAGTAATGCTGATATTACCACCATTTTCAAATTCGGTAAATGGGAACGGTTTGCAACAGGTCGGATGATTGTCAGTGCAGGTGCTGGTGTTGATGTTAATGGTACTACGAAAGTGTTTGGTCTTGGTGAACTTGGTGGTGAATACACTCATGCCATTAAAGAAGCTGAAATCCCCTCACACGTACACTCTTCTGGTGGGTTGTCTACAAACGTTGCTGGTGAACACACTCACACATTCAAACAACTGGATATTCGTGGCCCTGGCCCAGATACAAAACATGGTTTCCCTATTGCACAAATGAGTATGGCTAACTTCACAACCGCAGCAGCAGGTGGTCACCAACACATGATTATTGGTAACACTGGTGCTACAGGTGGTAGTGTTGCCATGAGTATGATGCCAACTTATGTTGCTGTGAACATGTGGAGACGTACAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9e662e0a2b81b19096dfb3e8854b6af2806fdb6a7c9030052703eaaf20051da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7501
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50