Protein

View in Explore
Genbank accession
YP_010058954.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAVQRRALTFNFQRAVTIGEYSRATVLEVAVAPLSSPSSSSLDATLVGGPEVQEVVLSNTVEAVFYLVPTDDPSLTERVTYRAAWRDKYMGRQHVQDFVMPDFDVDFDDLQNLGQIIGGETYVQWSDRMRPGGIAALNELGQVVDYEGNVVNGAAEAAIVQGNLNAEIVARQQGDASAVSSANAYTLQQVGQVYSTTAAQLSSAVSLLQNADLTERSARQSAVNQLNASLAQLQASISAQLAALQSSLGTTNGALNVKADLVGGKIPTSQLPDITIGRAVAVAGEEEMLALTSAQVQQGDFAVRPDGVWFLNGSNPAVIGNWVKFNSAGAVASVNGKTGSVVLTAADVNARPTGTPIPQNEITGLSASLAAKANTSTTSALSSRIGAIETDPTLVRTVDGEILRSVSGDYLVYLDDQLRLTTKDGSLINIGGGGGIIAIPDVTGLQAALDGKLDAGDQTNPLPHSTTHGAAGSDPILISQNQVSGLAAILSNNQLSPTSAHEARIAALETSGGGGGGGGEIAKANWFNGLAPYQVFDPADLQTVHGVTLRGPFSENGAGQFAYSPDGVAPAGHAYRYAYITPNGHLELREWNEDNPPDDDFVPQSALDATNAQVATKASQASVTALTGTVNGKADTSALNALTTAVGNKVEQSEFATLQGVVSGKADATTVAALQAAVNGKASDAALTALTATVGTKANLVSGTVPLAEIPNLPVSKITSLADSLAAKADLASGTVPLNQIPNLTVAKVTGLQSALDGKASLVDGKVPTSQIPNLALTNVVTVVNKAAMLALTSDQVQPGDVCVINQAPDIGSYILSGTNPSIEGNWVKLASPSDVAVLTVNGQSGVVVLGAADVGARPAGGAIAISEITNLQNTLNAKADNSAMTTALAGKTSPADVQTTLTQSQQNKLLANLVSTAAIATLSGQQSIDGVLAPLNSRVLLTAQSSSAANGLYVVNSGAWTRVADMAAGSFFVRGTTVMVSGGTNNANTFWQITSDSGLVGTNANNWTKVMTAGAPIVYTGSLGVAKVGNDFRAQVVSGGGITATASGLQLDPNVASRKVALDVPAGGPVVTIVHNLNTQDVDAAFRDKAAGDAVLLGWRPTGPNTISAEFSGTVAAGQYRVTIFG
Physico‐chemical
properties
protein length:1127 AA
molecular weight: 115043,04910 Da
isoelectric point:4,67861
aromaticity:0,04614
hydropathy:0,06344

Domains

Domains [InterPro]
DC_1073
STR
115–596
DC_1073 DC_1656 PF12789 DC_1609
DC_1656
STR
743–822
DC_1656
YP_010058954.1
1 1127
Architecture
STR
STR
STR
STR
STR 115-596 | STR 713-822 | STR 866-882 | STR 897-1127
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Pupper
[NCBI] 		2571249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010058954.1 [NCBI]
Genbank nucleotide accession
NC_054723 [NCBI]
CDS location
range 118067 -> 121450
strand +
CDS
GTGGCTGTTCAGCGCAGGGCGCTCACGTTCAACTTTCAGCGTGCCGTGACCATCGGCGAGTACTCGCGCGCCACCGTGCTCGAAGTCGCCGTCGCGCCGCTGTCCTCGCCCAGCTCCTCCTCGCTGGACGCCACCCTCGTCGGCGGCCCCGAGGTCCAGGAGGTCGTGCTCAGCAACACGGTCGAGGCCGTCTTCTACCTGGTCCCCACCGACGACCCGAGCCTGACCGAGCGGGTCACCTACCGCGCTGCCTGGCGTGACAAGTACATGGGGCGTCAGCACGTCCAGGACTTCGTCATGCCGGACTTCGACGTCGACTTCGATGACCTGCAGAACCTCGGCCAGATCATCGGCGGCGAGACCTACGTTCAGTGGTCGGACCGCATGCGCCCCGGCGGCATCGCCGCGCTCAACGAGCTGGGACAGGTCGTCGATTACGAGGGCAACGTCGTCAACGGTGCCGCCGAGGCCGCGATCGTCCAGGGCAACCTCAACGCCGAGATCGTCGCGCGCCAGCAGGGCGACGCGTCGGCGGTCAGCTCGGCCAACGCCTACACCCTCCAGCAGGTCGGCCAGGTCTACTCCACCACCGCCGCTCAGCTCAGCTCGGCGGTCTCGCTGCTGCAGAATGCCGACCTCACCGAGCGCTCCGCCCGGCAGAGCGCGGTCAACCAGCTCAACGCCTCGCTGGCTCAGCTGCAGGCCTCCATCTCGGCCCAGCTGGCCGCGCTCCAGAGCAGCCTGGGCACCACCAACGGCGCACTCAACGTCAAGGCCGATCTCGTCGGCGGCAAGATCCCGACCAGCCAGCTGCCCGACATCACCATCGGCCGCGCCGTGGCGGTCGCCGGTGAGGAGGAGATGCTGGCGCTGACCTCCGCGCAGGTGCAGCAGGGCGACTTCGCCGTCCGTCCCGACGGCGTGTGGTTCCTCAACGGGTCCAACCCGGCGGTCATCGGCAACTGGGTCAAGTTCAACTCCGCCGGAGCGGTGGCCAGCGTCAACGGCAAGACCGGCTCGGTGGTGCTCACCGCTGCCGACGTCAACGCCCGCCCCACCGGCACGCCGATCCCACAGAACGAGATCACCGGCCTGTCGGCGTCCCTGGCCGCCAAGGCCAACACCTCGACCACCTCGGCGCTCTCCTCGCGCATCGGCGCGATCGAGACCGACCCCACCCTGGTGCGCACTGTCGACGGCGAGATCCTGCGCTCGGTCTCGGGTGACTACCTGGTCTACCTCGACGACCAGCTGCGGCTGACCACCAAGGACGGCTCGCTGATCAACATCGGCGGCGGTGGTGGCATCATCGCCATCCCCGACGTCACCGGCCTGCAGGCGGCCCTGGACGGCAAGCTCGACGCTGGGGATCAGACCAACCCGCTGCCGCACTCGACCACCCACGGGGCGGCCGGGTCGGACCCGATCCTCATCAGCCAGAATCAGGTCTCCGGGCTGGCCGCGATCCTGAGCAACAACCAGCTCTCGCCGACCAGCGCGCACGAGGCGCGCATCGCCGCGCTGGAGACCTCCGGCGGTGGCGGCGGCGGTGGCGGCGAGATCGCCAAGGCCAACTGGTTCAACGGCCTGGCTCCCTACCAGGTCTTCGATCCCGCCGACCTGCAGACGGTCCACGGCGTCACCCTGCGCGGCCCCTTCTCCGAGAACGGTGCCGGGCAGTTCGCCTACAGCCCCGACGGCGTCGCCCCGGCCGGTCACGCCTACCGCTACGCCTACATCACCCCCAACGGCCACCTGGAGCTGCGGGAGTGGAACGAGGACAACCCGCCCGACGACGACTTCGTCCCCCAGAGCGCCCTGGACGCCACCAACGCGCAGGTGGCCACCAAGGCCAGCCAGGCCAGCGTTACCGCCCTCACCGGCACGGTCAACGGCAAGGCCGACACCTCTGCGCTCAACGCCCTCACGACCGCCGTCGGCAACAAGGTCGAGCAGAGCGAGTTCGCCACCCTGCAGGGCGTGGTCTCGGGCAAGGCCGACGCCACGACGGTCGCCGCGCTGCAGGCGGCGGTCAACGGCAAGGCCAGCGACGCCGCACTCACCGCGCTCACCGCGACTGTGGGCACCAAGGCCAACCTCGTCTCGGGCACCGTCCCGCTGGCCGAGATTCCCAACCTGCCGGTCTCGAAGATCACCAGCCTGGCCGACAGCCTGGCCGCCAAGGCCGACCTGGCCAGCGGTACCGTCCCGCTGAATCAGATCCCCAACCTCACCGTCGCCAAGGTCACCGGCCTGCAGAGCGCTCTCGACGGCAAGGCCAGCCTGGTCGATGGCAAGGTGCCCACCAGCCAGATCCCCAACCTGGCGCTGACCAACGTCGTCACCGTGGTGAACAAGGCCGCGATGCTCGCGCTGACGAGCGACCAGGTCCAGCCGGGCGACGTCTGCGTGATCAACCAGGCCCCCGACATCGGCAGCTACATCCTGTCCGGGACCAACCCCTCGATCGAGGGCAACTGGGTCAAGCTCGCCTCGCCGTCGGACGTCGCGGTGCTCACCGTTAACGGCCAGAGCGGTGTGGTGGTGCTCGGTGCCGCCGACGTCGGCGCGCGCCCGGCCGGTGGGGCCATCGCGATCTCCGAGATCACCAACCTGCAGAACACCCTCAACGCCAAGGCCGACAACTCGGCGATGACCACCGCGCTCGCGGGCAAGACCTCCCCGGCCGATGTGCAGACCACCCTGACCCAGTCTCAGCAGAACAAGTTGCTGGCCAACCTGGTGTCGACTGCGGCCATCGCCACCCTCTCGGGCCAGCAGTCGATCGACGGCGTGCTCGCGCCACTGAACTCGCGCGTGCTGCTGACCGCGCAGTCCTCGTCGGCGGCCAACGGCCTCTACGTGGTCAACTCCGGCGCGTGGACGCGCGTCGCCGACATGGCGGCGGGCAGCTTCTTCGTCCGGGGCACCACGGTGATGGTCTCCGGCGGCACGAACAACGCCAACACCTTCTGGCAGATCACCTCCGACTCCGGCCTGGTCGGCACCAACGCCAACAACTGGACCAAGGTGATGACCGCCGGTGCGCCGATCGTCTACACCGGCAGCCTCGGCGTGGCGAAGGTCGGTAACGACTTCCGGGCCCAGGTGGTCTCTGGCGGCGGCATCACCGCGACCGCTTCGGGGCTGCAGCTCGATCCCAACGTCGCCTCGCGCAAGGTCGCCCTCGACGTTCCCGCTGGTGGACCGGTGGTCACGATCGTCCACAACCTCAACACCCAAGACGTCGACGCGGCGTTCCGGGACAAGGCCGCCGGTGACGCGGTGCTCCTGGGCTGGCGGCCGACCGGGCCCAACACCATCTCGGCCGAGTTCTCCGGCACCGTGGCCGCAGGCCAGTACCGAGTGACGATCTTCGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
524dce8283d26e641e37eb0bc3127b3d1c3de23b295a877a33de13ef47165ed4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50