Protein

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Genbank accession
AFX93509.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLTIDGVVQIPTSADAVNGAYTVDGADILFSDDTVQKYLKPNQQLYFLFDTSWGDIGSGGGGGGGGNNGVMVERKFTTTGGETILDPKITFSSVLLFVDGEAKYPGEYFTISGNKLVYTDPMTAGRDVYALFGIPSSSMSLYATQEELSGVQANIDGLKTQLGAPWNGIVSDVYTYIDSVTSITSRAVPANINIVYTKKYSTASLSQSDIQLVREPSEDNVLLATKTWVQNGAINGKLLAFDNAGKAFRLNPVNGQYSIESLGGGDGGDDTVLIELAQQLSVKPVQLVENKVYNYTRAVKHTGGRGWIGKNTTFRCTNATASVPFVTSLKTAQGADNDLVNGTSGVANAIWSGILIDTNYSDTTGVVGFQFAENTLDNWVKCRFVDVVFKNSKFDNLAMQNGCIELRFENCRFENAGEDSVTVRKTCERVVFENCTVDKTALVAHVSSGNAKFGDGIVVKAKFVTINNCTFKDVGNNIKGAGIANNAEDNDNVDQASYNKYTNNTFINCYGGMGIGTVNAGFIAAGQLIGDLIITGNEFINTQANAIGIRYVKNVQIRDCIINKQNLQGYHAVELINVVNVDAAATVLNASGGACTVTNCNGKVDIHANDVSKANALNSLVIGNCDGLKFTADLYLSGRTAMTVDSFSNGKIDVRLRGVAKAGLVGNIVSRSEINVAATSCGNNGVTMTALNNSVLRAEVYDAGTEADVTYVSARLVSGSRNRVFVTSTSGQTNRPSYDILVEAGVSNGALYSDCSAGKTGKVNIVTGATITQFENL
Physico‐chemical
properties
protein length:777 AA
molecular weight: 82478,37340 Da
isoelectric point:5,05920
aromaticity:0,07979
hydropathy:-0,06396

Domains

Domains [InterPro]
IPR012334
STR
264–616
IPR012334
IPR011050
STR
337–598
IPR011050
IPR006626
Unmapped
403–425
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1084
AFX93509.1
1 777
Architecture
STR
RBD
STR 264-616 | RBD 617-777
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFX93509.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9939
Central domain 271 752 483 0,9874
C-terminal 753 777 24 0,4344
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-752
C-terminal
753-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage phiMAM1
[NCBI] 		1262513 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus MAM1
Host Serratia sp.
[NCBI] 		616 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Serratia

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
b19236077e15fe970b840288ac6234edac10950d6a0f740cbe5c6e18c38f55e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7431
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50