Protein

View in Explore
Genbank accession
BAN62881.1 [GenBank]
Protein name
unknown protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MQYTGNLGLKKPEGTDVVNIDDLNQNFDILDVEVTKLATASEAGRMSAADKVKLDGIESGAQRNTVTSVNGKTGAVTLTSSDVGASPTGHTHAFAEITSKPTTLSGYGITDAIPASQKGSANGVASLDGSAKVPTPQLPNASTTQAGIVQLEDTLTSTSTTKAATANAVKQVNDTVVAHLADYVKHPAYAVASGSANAYSVTLTPAPTAYVDGMAVTVKINVDSTGASTLNVNGLGAKPLKKANGNDVTNLKANGVYTFRYNASTGNFILQGEGGAGNAQPAHVLSGKTFTNDSGEQTGTMPNRSAENFHMPALETAVWPGDKIFLRPPQGYYDGNSWVTASEPDLIASNIRQGVNIFGVVGTLVEGKKFASGTVTSSPNYGYFRVSNSGALHGYPYITVSGLTFQPTVIHVFVPDGNTDITIFDNRRNYLGSASADITMQNTVYLNNSDDAYVNSSGFRLPVTNPNTLFTWYAYE
Physico‐chemical
properties
protein length:476 AA
molecular weight: 49809,50750 Da
isoelectric point:5,51045
aromaticity:0,07773
hydropathy:-0,23571

Domains

Domains [InterPro]
DC_1296
ATT
1–92
DC_1296 IPR005068
DC_1594
STR
153–441
DC_1594
BAN62881.1
1 476
Architecture
ATT
STR
ATT 1-92 | STR 142-441 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAN62881.1
1 476
Domain Start End Length (AA) Confidence
N-terminal 1 302 302 0,8526
Central domain 303 465 164 0,3404
C-terminal 466 476 10 0,9945
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-302
Central
303-465
C-terminal
466-476

Taxonomy

  Name Taxonomy ID Lineage
Phage Geobacillus phage phiOH2
[NCBI] 		3378811 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAN62881.1 [NCBI]
Genbank nucleotide accession
AB823818.1 [NCBI]
CDS location
range 2517 -> 3947
strand -
CDS
GTGCAGTATACAGGGAACTTAGGTTTAAAGAAACCTGAAGGCACAGATGTCGTCAACATTGATGACTTGAACCAAAACTTTGACATTTTGGACGTGGAAGTGACTAAGCTAGCTACGGCATCAGAAGCAGGGCGAATGTCTGCGGCAGACAAAGTTAAACTGGATGGTATCGAGTCGGGCGCACAACGGAATACAGTAACGAGTGTCAACGGAAAAACCGGCGCTGTCACCCTCACCTCCTCTGATGTCGGAGCAAGTCCAACAGGGCACACACATGCATTTGCGGAGATCACAAGTAAACCGACAACGCTGTCTGGGTACGGAATCACAGACGCGATCCCGGCCAGCCAAAAAGGCTCGGCAAACGGCGTCGCCTCTCTCGACGGGAGTGCAAAAGTGCCGACGCCACAATTGCCAAACGCCAGCACCACACAAGCTGGTATCGTCCAACTCGAAGATACATTGACAAGTACTTCGACGACAAAAGCGGCGACGGCGAATGCGGTGAAACAGGTGAATGATACAGTTGTTGCGCATTTGGCTGATTATGTGAAGCATCCTGCTTATGCAGTTGCCAGCGGTTCGGCAAATGCTTATTCAGTCACTTTGACCCCTGCTCCTACTGCTTATGTAGATGGGATGGCTGTTACCGTAAAAATTAATGTGGATTCCACGGGAGCTTCTACTTTAAATGTGAATGGTCTAGGGGCAAAACCATTAAAAAAAGCTAATGGAAATGACGTAACAAATTTAAAAGCAAACGGCGTTTACACCTTTAGATACAACGCTTCAACAGGAAATTTTATCTTACAGGGTGAAGGGGGGGCTGGTAACGCTCAACCCGCACATGTATTGAGCGGAAAGACGTTCACAAATGATAGCGGAGAACAAACAGGAACAATGCCGAACCGTTCAGCAGAAAACTTTCACATGCCGGCCCTTGAAACTGCTGTTTGGCCGGGAGATAAAATTTTCCTAAGACCGCCACAGGGTTATTATGATGGAAACTCTTGGGTTACAGCGTCAGAACCGGATTTAATCGCTTCAAACATTCGACAGGGTGTAAATATTTTTGGTGTTGTTGGAACGTTAGTTGAGGGAAAAAAGTTTGCAAGTGGTACAGTAACATCATCCCCTAACTATGGATATTTTAGGGTCTCAAATTCAGGGGCTTTGCATGGTTATCCTTATATAACTGTAAGCGGATTAACATTTCAACCGACAGTCATACATGTTTTTGTACCGGACGGAAACACAGATATAACAATATTCGATAACCGACGGAACTATTTAGGAAGTGCCAGTGCTGATATTACGATGCAAAACACCGTATATCTCAATAATTCGGATGACGCTTATGTAAATTCATCGGGTTTTAGATTACCTGTAACTAACCCTAATACTTTATTTACATGGTACGCCTATGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ecacd1b8636b8265757fa107fce4f813dccad6816540b93b885291474e8b285d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Strabovirus phi OH2 infected to Geobacillus kaustophilus NBRC102445 Doi,K., Martono,H., Nagayoshi,Y., Tsuda,K., Fujino,Y. and Ohshima,T. 2015-01 — GenBank