Protein

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Genbank accession
AXH70970.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MYDNLITRLLLKSDGGETLLPWLLTAGNTITQERILPWDQTNAYAENELVINPSDNHVYHANAAIVANTAWNAADWTQVDTHVGYVQPYDENRQYEPDDLVHFNDKLFVSNKATTGTFVVADWVELSNDGQMQDIFVYDDDSETGTRNVTDIYFVTAVPAPYVHILYDTIVGVGSSLMSSIVKLNSVWIDADDSPFPFRGVDILGQANPGVTLQNVKDRIADDIALANGNTLFIVMAGTSDCNTYLAPGGIDDSDTGDILSWESMTTEQKTTAEGLMRDIVTALQPHGDVAIASIPYVDPRSALSIMADKGRNLHAGSWNDNLVSPLCEELTPNWYDAGNGAPVFDFYSVGYADPSILDDDNLHYYMDYDYDATEIGYADGDGTFSMREYMIKRLADMGNIPAAPFDTDKYENRIIINLADDPTYTQRPAIRRKANNIAVDKDAGNQENLTVGFLEGGTVPAGLALAIEFTSPGVIRRGITADSMHYDEGIRDPNILNTSINIINSRTMTIKIANAGKGRIQMAGLYQSTAENGMETEVTFTDDNGAKTITYKNTLDNSGSYTVEDYFGEAEYDVRVAGELVLSFNGIGTDNASDDSKYSGVSGILLDIEK
Physico‐chemical
properties
protein length:611 AA
molecular weight: 66968,22280 Da
isoelectric point:4,17877
aromaticity:0,09165
hydropathy:-0,28805

Domains

Domains [InterPro]
DC_1986
ATT
17–86
DC_1986 SSF52266 DC_1476
G3DSA:2.10.10.90
STR
37–124
G3DSA:2.10.10.90
DC_1986
ATT
81–173
DC_1986
AXH70970.1
1 611
Architecture
ATT
STR
RBD
ATT 17-173 | STR 174-365 | RBD 366-611
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70970.1
1 611
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,9163
Central domain 159 422 265 0,8296
C-terminal 423 611 188 0,8426
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-422
C-terminal
423-611

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70970.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 226086 -> 227921
strand +
CDS
ATGTATGATAATCTCATCACTCGCCTACTGCTTAAATCAGACGGCGGAGAAACATTGTTGCCTTGGTTATTAACTGCCGGTAACACGATCACACAAGAGCGCATCTTGCCTTGGGATCAAACAAATGCTTATGCTGAAAATGAACTGGTTATTAACCCGTCTGACAATCACGTTTACCATGCTAATGCCGCTATCGTTGCCAATACCGCATGGAACGCTGCAGACTGGACACAGGTCGATACTCACGTAGGTTACGTTCAGCCTTATGATGAAAACCGTCAATATGAACCTGATGATCTTGTTCACTTCAATGACAAACTGTTCGTAAGTAACAAAGCAACTACTGGCACGTTTGTTGTTGCGGACTGGGTTGAACTATCTAATGACGGACAGATGCAAGACATCTTCGTTTACGATGACGACTCGGAAACAGGTACACGCAATGTTACCGACATCTATTTTGTAACTGCTGTTCCTGCTCCGTATGTACACATCCTTTACGATACAATCGTAGGTGTCGGTTCATCTTTAATGTCATCTATCGTGAAACTCAACAGTGTTTGGATTGATGCCGATGACAGCCCATTCCCATTCCGTGGTGTTGATATCCTAGGTCAAGCAAACCCTGGCGTCACACTACAGAATGTAAAAGACCGCATCGCGGATGACATCGCTCTAGCCAACGGCAATACGCTATTCATAGTCATGGCAGGTACTAGTGACTGTAACACTTATCTAGCACCAGGCGGCATTGATGATAGCGACACAGGCGATATTCTGTCATGGGAATCAATGACTACCGAACAGAAAACGACTGCTGAAGGTTTAATGCGTGACATCGTCACTGCGCTACAGCCTCATGGCGACGTAGCTATCGCATCAATCCCTTATGTGGATCCACGTAGTGCTTTGTCCATTATGGCCGATAAAGGCCGTAACTTGCATGCAGGTTCATGGAATGACAATCTAGTTAGTCCGCTATGTGAAGAACTAACACCTAACTGGTATGATGCAGGTAACGGAGCTCCCGTATTCGACTTCTACTCTGTAGGCTATGCAGACCCATCTATTCTAGATGACGATAACCTGCACTACTATATGGATTACGATTACGACGCGACTGAGATCGGCTATGCCGATGGCGACGGTACGTTCTCAATGCGTGAATACATGATCAAGCGACTTGCTGATATGGGTAACATTCCTGCTGCTCCGTTCGATACTGATAAGTATGAGAACCGTATCATTATCAACCTGGCTGATGATCCTACGTATACGCAGCGTCCAGCGATCCGTCGCAAGGCAAACAACATTGCTGTAGACAAAGACGCAGGCAACCAAGAAAACCTCACTGTGGGTTTCCTAGAAGGCGGTACGGTACCTGCTGGCTTAGCATTGGCTATCGAGTTCACTAGCCCTGGCGTTATTCGCCGAGGCATTACTGCCGATTCGATGCACTATGATGAAGGCATTCGTGATCCGAATATCCTAAATACCAGCATTAACATTATCAACAGTCGCACAATGACGATCAAGATTGCTAATGCAGGTAAAGGCCGTATTCAGATGGCTGGCCTATATCAGTCTACTGCTGAAAACGGAATGGAGACCGAAGTCACTTTCACTGATGACAATGGCGCTAAAACCATTACGTACAAGAACACACTAGACAACTCTGGCAGCTACACAGTAGAAGACTACTTTGGTGAAGCAGAGTATGACGTGCGTGTTGCTGGCGAGCTGGTATTGTCGTTTAACGGCATTGGCACCGATAATGCTTCTGACGACAGCAAATATTCTGGTGTTTCTGGCATCCTATTGGACATCGAAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d2ff85601953dfbd90d9edb0115e4ee68e8635886fd628a8fd8fea45e09111d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank