Protein

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Genbank accession
WYA77376.1 [GenBank]
Protein name
putative packaging DNA stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRGQIMQIPMLYGDGRDHTDFDYTTNMPVNMLVVVRPLKGADGYLRMFPGVKKRADVDGISRGVNWNTLKKSPYRVMGGKLYNNGAVVGDVPGTDRTPMSHSRNSVAVVTDGTMRQYYYTDNSVKVFANWPKGGTPENPQYSWGQIADVVWHRGRYVFSTVDTDTFWVSDILDESHPDKIAPAYRAETMPDGILAIRTFHDYIVCFGTASIEFWGLTGSTSPIYQQQPSYTTSVGIAGRQAVCAFNDTFAFVTSPSCGVTTIGVMAGGGGAWEDIASNQVRKILETYSVQELENAICEALTFRSFKLLIVHLPRHTLTFDASASAGTGMPCWSIIKTDYPDLKPHRAIDFMNEGNVITCGDKRSGLLGELDETTTKQYDADQEFILFTQFVALENAMVNDFELDASVGGDSKVSRLWLSCTEDGAIYTQEQMIDYNTPNQWLKRVLMRKIGRIRTALAFKVRGVGATPATLARARIRVS
Physico‐chemical
properties
protein length:479 AA
molecular weight: 53154,69790 Da
isoelectric point:6,26891
aromaticity:0,10230
hydropathy:-0,22944

Domains

Domains [InterPro]
IPR021098
STR
6–478
IPR021098
IPR021098
STR
7–478
IPR021098
WYA77376.1
1 479
Architecture
STR
STR 6-478 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA77376.1
1 479
Domain Start End Length (AA) Confidence
N-terminal 1 345 345 0,6705
Central domain 346 468 124 0,1170
C-terminal 469 479 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-345
Central
346-468
C-terminal
469-479

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_IUE
[NCBI] 		3135018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA77376.1 [NCBI]
Genbank nucleotide accession
PP481221 [NCBI]
CDS location
range 30921 -> 32360
strand -
CDS
ATGCGCGGTCAAATTATGCAGATCCCGATGCTGTACGGCGACGGGCGCGACCACACTGATTTTGATTACACCACTAATATGCCGGTCAATATGCTGGTGGTTGTCCGCCCGCTGAAAGGCGCGGATGGCTATCTTCGAATGTTCCCTGGCGTGAAGAAGCGCGCCGACGTCGATGGGATCTCACGCGGCGTTAACTGGAACACCCTGAAAAAATCGCCGTACCGCGTGATGGGCGGGAAACTGTACAACAACGGCGCGGTAGTCGGCGACGTACCCGGAACAGACCGCACGCCGATGAGTCACAGCCGCAACAGCGTGGCGGTGGTTACGGACGGCACGATGCGCCAGTATTACTACACCGACAACAGCGTTAAGGTGTTCGCCAACTGGCCCAAAGGCGGAACGCCGGAAAATCCGCAATATAGCTGGGGACAGATCGCCGATGTGGTGTGGCACCGTGGGCGCTATGTATTCAGCACCGTAGATACAGACACTTTCTGGGTGTCGGATATTCTCGACGAGTCGCACCCGGACAAGATCGCGCCCGCCTACCGTGCGGAGACTATGCCGGATGGCATTCTGGCGATCCGCACGTTCCACGATTACATCGTGTGCTTTGGCACCGCGTCCATCGAATTTTGGGGATTGACGGGCAGCACGTCGCCGATCTACCAGCAACAGCCCAGCTATACAACGAGCGTAGGCATCGCCGGTCGCCAGGCTGTTTGTGCCTTTAACGATACGTTTGCTTTTGTGACATCCCCATCCTGCGGTGTAACCACCATCGGCGTAATGGCTGGGGGCGGTGGCGCGTGGGAAGACATCGCCAGCAACCAGGTGCGCAAGATTCTGGAAACCTACAGCGTGCAGGAACTGGAAAACGCCATTTGCGAGGCGCTAACCTTCCGATCCTTCAAACTGCTGATCGTCCACCTTCCACGGCATACGCTGACATTTGACGCCAGCGCAAGCGCCGGAACGGGGATGCCGTGCTGGTCAATCATTAAGACCGACTACCCCGACCTAAAACCGCACCGCGCCATCGATTTCATGAACGAAGGCAACGTGATCACCTGCGGCGACAAGCGCAGCGGGCTGCTGGGCGAACTGGATGAAACCACTACGAAGCAATACGACGCGGATCAGGAATTTATTCTGTTTACGCAGTTTGTGGCGCTCGAAAATGCAATGGTTAACGACTTCGAGTTAGATGCCAGCGTGGGCGGTGATTCTAAAGTGTCCCGTTTGTGGCTGTCCTGTACCGAAGACGGCGCGATCTACACTCAGGAGCAGATGATCGACTACAACACGCCGAACCAATGGCTAAAGCGCGTATTGATGCGCAAAATCGGGCGTATTCGCACCGCGCTGGCGTTTAAGGTGCGCGGCGTAGGCGCTACACCGGCAACGCTGGCACGCGCCCGCATCCGCGTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe242da34e2d52c989779f1fe8f3c7427d08aaf5c69380905692e33e1937bd6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50