Protein

View in Explore
Genbank accession
QBP06153.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSESRKRLSLSSKTKKATKRTRKETPKVELKENLEVKQETPEVVEQPIEESACDSVPAERKRLSIRRKKKEPVQIQREDTEVSEGIELVGYVDYNKAAKKRAERKKDAELKAAKAPAKGDSASKEKAAEDEWRKAVSAAADSVKEEAVPARKRLSLGKKKTEKKSEIKEEKAPEVVSEQKKQLKEEVITEVVAEEVLETPQERIMSALDSQLSTMAKLAKGDSSVEPKSITEQKIENLEGQVRDMRRMVLEMSGMAAQNTIVGGLGAGSPGSGEVNLLKLDDVSETSFDKTSDGQLMLWDSASQKFVSSAERGVDNFFQEGIGGYEFTGGFADREVGATGSSDFGTFIPYTQAMADAAQWRRFGFSEAQQQANDVAYFPTDARPNRVFDQTKGLFGGMFMPSGVTELIDYGWQDLTGGTFSPGHPNDGDPYVGYSTEVNSGDPADFNYTAADGSFDFRECQAGDLLQLRFDFNVNVQIANTTLEIALIWQTRDANDEPTFTFALTGQPIFYGTGTVGRTFLNRPFLSAYFASAEDTNARALLAIRADNPIQVAPLSTLVTIQR
Physico‐chemical
properties
protein length:564 AA
molecular weight: 62091,66650 Da
isoelectric point:5,08899
aromaticity:0,07447
hydropathy:-0,60993

Domains

Domains [InterPro]
DC_2218
STR
88–552
DC_2218
Coil
Unmapped
229–249
Coil
QBP06153.1
1 564
Architecture
STR
STR 88-552 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B68
[NCBI] 		2545437 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP06153.1 [NCBI]
Genbank nucleotide accession
MK016664.1 [NCBI]
CDS location
range 122214 -> 123908
strand +
CDS
ATGTCTTCCGAAAGCCGTAAGAGGCTTAGTCTTTCTTCCAAGACCAAGAAAGCAACTAAGCGAACCCGAAAAGAAACACCGAAGGTTGAACTCAAAGAGAACCTTGAGGTGAAGCAAGAGACTCCTGAAGTTGTTGAGCAACCGATTGAAGAGTCTGCTTGTGATTCCGTTCCCGCCGAACGTAAGCGTCTGTCGATCAGGCGCAAGAAGAAGGAACCCGTTCAGATCCAAAGAGAGGATACTGAAGTTTCTGAGGGTATCGAACTCGTCGGTTATGTTGATTACAACAAAGCCGCCAAGAAGCGCGCCGAGCGCAAGAAGGATGCTGAGTTGAAGGCTGCTAAGGCACCTGCCAAGGGTGATTCTGCTTCCAAGGAAAAGGCAGCAGAGGATGAGTGGCGCAAGGCTGTTTCTGCTGCAGCGGATTCTGTCAAGGAAGAGGCAGTACCTGCTCGCAAGAGACTGTCACTCGGTAAGAAGAAAACCGAGAAAAAGAGTGAAATTAAAGAGGAAAAGGCACCAGAGGTTGTATCCGAACAAAAGAAACAACTAAAAGAAGAAGTAATAACTGAAGTAGTAGCGGAAGAGGTTCTTGAGACTCCTCAAGAGCGAATCATGTCCGCTCTGGACAGTCAACTCTCCACCATGGCGAAGTTGGCCAAGGGCGATTCTTCGGTTGAACCCAAGAGTATCACCGAGCAAAAGATCGAGAATCTGGAAGGTCAGGTTCGCGACATGCGTCGCATGGTTCTGGAAATGTCAGGAATGGCAGCACAGAACACTATCGTTGGTGGACTTGGTGCTGGATCCCCTGGTTCGGGTGAAGTAAACCTGCTGAAACTGGACGACGTCTCGGAAACTTCCTTTGACAAGACCAGCGACGGTCAGTTGATGCTGTGGGACTCTGCTTCCCAGAAGTTCGTATCATCCGCTGAGCGTGGTGTTGACAACTTCTTCCAAGAAGGTATTGGTGGTTACGAATTCACTGGTGGTTTTGCCGACCGTGAAGTTGGTGCCACTGGTTCTTCTGACTTTGGCACCTTTATTCCCTACACTCAGGCAATGGCCGACGCGGCCCAATGGCGCCGCTTCGGTTTCTCTGAGGCACAACAGCAAGCTAATGACGTTGCCTACTTCCCAACCGATGCTCGTCCCAACCGAGTTTTTGACCAAACTAAGGGTCTGTTCGGTGGTATGTTCATGCCTTCCGGGGTAACTGAACTGATTGACTATGGTTGGCAAGACCTGACCGGTGGTACCTTTAGTCCCGGTCATCCCAACGATGGTGATCCATATGTTGGTTACAGTACTGAGGTAAATAGTGGTGATCCAGCTGACTTTAACTATACTGCAGCGGATGGTTCTTTTGACTTCCGCGAGTGCCAGGCCGGTGACCTTCTTCAACTTCGTTTTGACTTTAACGTCAATGTACAGATCGCTAACACGACTCTGGAAATTGCTCTTATCTGGCAGACCCGCGATGCGAATGATGAACCTACGTTCACTTTCGCTCTGACCGGTCAACCTATTTTCTACGGTACTGGTACTGTCGGACGTACCTTCCTCAACCGTCCTTTCTTGTCCGCATACTTCGCATCTGCCGAAGATACTAACGCACGAGCACTACTCGCAATCCGTGCTGACAACCCAATTCAGGTTGCACCTCTGTCCACCCTCGTCACCATCCAACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
303250c51d409a0d1cc3f8f5c8d06c33c61d90151d2c08ee4cf6ba0d3dbf94f8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6597
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank