Protein
View in Explore- Genbank accession
- QOI69066.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TF
- Protein sequence
-
MILKTILKINPNAKVSVKGDDIDTCQIEWGDGTTPISKDDIRAQLPSALDNALDNLRIERNNKLKDTDFYALSDVTMSSEMTTYRQALRDLPSNYTTSDSSTLTEDLSNLVWPTKP
- Physico‐chemical
properties -
protein length: 116 AA molecular weight: 12980,40140 Da isoelectric point: 4,57687 aromaticity: 0,05172 hydropathy: -0,56552
Domains
Domains [InterPro]
DC_0890
STR
1–107
STR
1–107
G3DSA:6.10.140.1310
STR
15–89
STR
15–89
IPR031893
ENZ
55–116
ENZ
55–116
1
116
Architecture
STR 1-116
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Pelagibacter phage Mosig EXVC030M [NCBI] |
2759214 | No lineage information |
| Host |
Candidatus Pelagibacter ubique HTCC1062 [NCBI] |
335992 | Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QOI69066.1
[NCBI]
Genbank nucleotide accession
MT647606.1
[NCBI]
CDS location
range 82270 -> 82620
strand -
strand -
CDS
ATGATTTTAAAAACAATTTTAAAAATAAATCCTAATGCTAAAGTTTCCGTAAAAGGTGATGATATAGATACTTGTCAAATTGAATGGGGTGATGGCACAACTCCAATTTCTAAAGACGATATTAGAGCACAACTTCCTTCAGCCCTTGATAATGCTTTGGATAATTTAAGAATTGAAAGAAATAATAAGTTAAAAGATACCGATTTTTACGCATTATCAGATGTAACAATGTCGTCTGAAATGACAACTTATAGACAGGCTTTAAGAGATTTGCCAAGTAACTATACAACAAGTGATAGTTCAACATTAACTGAAGATTTAAGTAATCTAGTATGGCCTACAAAACCATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
3da8fe9a50833571558e5c3a1bbdc6a5e3db4a03a91be58c68b7ff77ba4562e6
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50