Protein

View in Explore
Genbank accession
YAF79343.1 [GenBank]
Protein name
host specificity tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAIKAGWVGSSAVAETGQRWMSAAMQAVRLGRPAYMSAMVGRSKEIHYSIGASNSYNKDTLINWMKAQGSTPVVITITGNIVSHSTGVPCLDFPSSLTNEYVTLIINSGVHVLGRGGNGGSNSAGGAGGNAINNGIGTRLRINNNGIIGGGGGGGAGARYHPFPQMDMIFGGGGGRPFGAAGKAGGGAAAASAGTISAPGKGTVSGVHYGGNGGDLGSAGKSSYIQGGTGGTVHSGGAAGKAVTGNAPRWDKVGTIYGARV
Physico‐chemical
properties
protein length:261 AA
molecular weight: 25580,33310 Da
isoelectric point:10,14605
aromaticity:0,06130
hydropathy:-0,07318

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_1679
STR
4–165
DC_1679
YAF79343.1
1 261
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-165 | RBD 166-261
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ETE131P06
[NCBI] 		3459904 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF79343.1 [NCBI]
Genbank nucleotide accession
PX104378.1 [NCBI]
CDS location
range 126767 -> 127552
strand -
CDS
ATGGCAATTAAAGCAGGTTGGGTCGGATCATCGGCTGTTGCTGAGACTGGTCAACGGTGGATGAGCGCCGCAATGCAAGCTGTACGCTTAGGTCGTCCGGCGTATATGTCAGCGATGGTCGGACGTTCTAAAGAGATTCATTATAGCATTGGCGCTAGTAACTCTTACAATAAAGACACTCTTATTAACTGGATGAAAGCACAAGGATCTACTCCGGTAGTAATTACTATCACCGGTAATATTGTTTCCCATTCTACTGGCGTTCCTTGTCTTGATTTCCCTAGCTCACTAACAAACGAATATGTAACACTCATTATTAACTCTGGTGTTCATGTATTAGGTCGGGGAGGAAATGGCGGAAGTAACTCTGCTGGCGGAGCAGGAGGAAATGCAATAAATAACGGAATTGGAACTCGTTTAAGAATAAACAATAATGGTATTATTGGTGGTGGTGGTGGTGGCGGTGCTGGTGCTAGATACCATCCTTTCCCTCAAATGGATATGATATTTGGCGGCGGCGGAGGCCGTCCATTTGGTGCGGCTGGTAAGGCAGGAGGCGGCGCAGCGGCAGCATCTGCTGGTACAATTTCTGCCCCAGGTAAAGGCACTGTTTCTGGGGTTCACTATGGAGGAAATGGTGGAGATTTGGGATCTGCTGGCAAATCTTCATATATTCAAGGTGGTACTGGAGGAACTGTTCACTCTGGTGGTGCGGCTGGTAAGGCTGTTACTGGTAATGCTCCACGCTGGGATAAAGTAGGCACGATCTACGGTGCTCGCGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ad65704cbf4348bf068d0aa8465619528a5e23a451f6106763942ff2cbea9f3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9412
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank