Protein

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Genbank accession
WYX89403.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVKNMITGSKGGSSKPHTPVEMEDNLISINRIRILLAVSDGEVDPDFSLKDLYFDDVPVMNQDGSLNFQNVKAEFRPGSQTQDYIQGFTDTASEITVARDLTAATPYIISVTNKNLSAIRIKILMPRGFTQEDNGDLTGVRVEYAVDMAIDGAEYNEVLHDVIEGKTMSGYDRSRRIDLPAFNERVLLRVRRLTDSTSARVTDLIKMQSYAEVVDAKFRYPMTGLVYVEFDSELFPNALPNISIKKKWKIINVPSNYDPISRTYSGSWDGTWKKAWSNNPAFVLYDLITNQRYGLDQRELGIALDKWSIYECAQYCDQMVPDGKGGTEPRYLCDVVIQSQVEAYQLVRDICSIFRGMSFWNGESLSIVIDKPRDPSYIFTNDNVVNGEFTYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFETEAALRFGYNSTSITAIGCTRRSEANRRGRWILKTNVKSTTVNFATGLEGMIPTVGDVIVVSDNFWSSALTLNLSGRLMEVSGLQVFTPFKVDARAGDRILVNKPDGKPVGRTIARVSDDGKTLTLNTTFGFDVHPDTIFAIERTDIAQQRYVVTGITKGDGDEEFTYNITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVLPAPENVKIESYSRVVQGASVETMHVSWDKVEYASLYEMQWRKDNGNWNNTPRTANKETEVEGIYAGNYHVRVRSVASNGSASGWSKIVSAELTGKVGEPEKPINLTASDDEVFGIRVKWGMPEGSGDTAYIELHQAPNGADGHPLVDQATLLTLVPFPQYEYWHSILPAGHVVWYKARSVDKIGNVSDWTDFVRGMASTDTSIITDHIKVDIENSEGYKWLEENAIKSNDKIHSAAESIIQNALANDTDVRRMRVENGKRKAEFLQSLKLIADETEARVTAITQLNAQFDEKLTAQNSELREVIANSTETLSQQINQLTATFEGEINGVKQDVTAKITEVNKAITNEAEARASADQALSTQIGDTQSAVNQKLDSWVNADSIGAMYGVKLGLRYNGQEYSAGMALSLVGDGSGVKSQFLFDAGRFAIINNQQSGGFTLPFVVENNQVFINSLLVKNGSIGNAQIADQINSNNWQSGAAGWMINKNGYAEFNQVTVRGGVYASYGSFTGSVYAQDGWFRGTVYAEKIEGDVAKAVVLPFNGSVHIPAVNYNRHLAIPYVGVNARTYSGGTWGKGTVWIDSTYGGRLSTAQTAALSGGSTGYILLPAGNATTLTFSGSLNHADAVPFVTVLLFKA
Physico‐chemical
properties
protein length:1258 AA
molecular weight: 138933,67600 Da
isoelectric point:4,95763
aromaticity:0,09459
hydropathy:-0,31820

Domains

Domains [InterPro]
DC_0014
STR
1–1245
DC_0014
IPR053171
Unmapped
3–877
IPR053171 IPR015406
IPR055385
ATT
92–216
IPR055385 IPR032876 IPR036116
IPR013783
STR
626–719
IPR013783
WYX89403.1
1 1258
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-216 | STR 217-338 | ATT 339-487 | STR 488-1245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYX89403.1
1 1258
Domain Start End Length (AA) Confidence
N-terminal 1 485 485 0,8652
Central domain 486 1093 609 0,0941
C-terminal 1094 1258 164 0,5707
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-485
Central
486-1093
C-terminal
1094-1258

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sephi301i
[NCBI] 		3134903 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYX89403.1 [NCBI]
Genbank nucleotide accession
PP503414.1 [NCBI]
CDS location
range 24099 -> 27875
strand +
CDS
ATGGTTAAAAATATGATAACTGGCAGTAAGGGCGGTTCATCTAAACCGCATACACCTGTTGAAATGGAAGATAACTTGATTTCAATTAACAGGATCAGAATTCTTTTAGCTGTTTCTGATGGTGAAGTTGATCCAGACTTTTCATTGAAAGATTTATATTTTGATGACGTTCCGGTTATGAATCAGGACGGGTCACTAAACTTTCAGAATGTTAAAGCTGAATTCAGACCAGGCTCACAAACGCAAGATTATATTCAGGGATTCACTGACACGGCGAGTGAGATTACTGTTGCTCGCGATCTTACGGCTGCAACTCCTTATATTATTTCCGTGACTAATAAAAACCTTTCCGCGATCCGTATTAAAATTTTAATGCCGCGAGGGTTTACACAGGAGGATAACGGAGATTTAACAGGCGTTCGCGTTGAATACGCCGTTGATATGGCTATTGATGGTGCTGAATATAACGAGGTTTTGCATGATGTGATCGAAGGTAAAACAATGAGCGGTTACGACAGAAGCCGCCGAATTGATTTACCCGCATTCAATGAGCGTGTTTTATTGCGTGTTCGTCGCCTGACAGATAGCACGTCAGCAAGGGTTACGGATTTGATTAAGATGCAGAGCTACGCAGAAGTAGTAGACGCTAAGTTTCGTTATCCCATGACTGGTTTAGTTTACGTTGAGTTTGACAGTGAATTATTCCCTAATGCTTTGCCGAATATCAGCATTAAAAAGAAATGGAAAATCATTAATGTTCCGTCTAATTACGATCCGATTAGCCGCACATATTCAGGCTCTTGGGATGGAACTTGGAAAAAGGCATGGAGCAATAACCCTGCTTTTGTTCTGTATGATTTAATCACCAATCAGCGTTACGGACTCGACCAACGCGAATTAGGCATTGCGCTTGATAAGTGGAGTATTTACGAATGTGCGCAATATTGCGATCAGATGGTTCCAGATGGCAAGGGTGGAACAGAGCCGCGCTATCTATGCGACGTTGTGATCCAGAGTCAAGTAGAGGCTTATCAGCTTGTTCGTGATATTTGCTCAATCTTCCGAGGAATGAGTTTTTGGAATGGTGAGAGCCTTTCAATCGTAATCGACAAGCCGCGCGATCCGTCATACATCTTTACTAATGACAACGTGGTTAATGGTGAATTTACTTACACGTTTGCCAGCGAAAAGAGCATGTATACACAATGCAACGTGACTTTCGACGACGAACAAAACATGTATCAACAGGACGTTGAAGGAGTTTTTGAAACAGAGGCTGCGTTACGTTTTGGATATAACAGCACGTCAATAACTGCCATTGGATGCACCCGACGCAGTGAGGCTAATCGCCGTGGTCGCTGGATTCTAAAAACCAACGTTAAGAGCACAACAGTAAACTTTGCTACTGGCCTGGAAGGTATGATCCCAACGGTAGGCGATGTAATTGTTGTTTCGGATAACTTCTGGTCAAGCGCCTTAACGCTGAATCTATCAGGTCGCTTGATGGAGGTTAGCGGGTTGCAGGTGTTCACGCCGTTTAAGGTAGACGCAAGAGCAGGTGATCGCATTCTGGTAAATAAGCCGGATGGTAAGCCAGTTGGTAGAACCATTGCGCGTGTGAGCGATGACGGCAAAACGCTAACGCTAAACACAACGTTTGGCTTTGACGTTCATCCTGACACCATTTTTGCAATCGAAAGAACGGATATTGCACAGCAACGCTATGTTGTAACCGGAATCACTAAAGGTGATGGTGATGAAGAATTTACCTACAACATAACGGCTGTTGAATACGATCCGAATAAATACGATGAAATTGATTATGGTGTAAACATTGATGACCGTCCGACTTCAATCGTGCAGCCTGACGTATTGCCAGCACCTGAAAACGTCAAGATCGAATCTTATTCGCGAGTTGTTCAGGGCGCGAGCGTGGAAACAATGCACGTTTCATGGGATAAAGTTGAATACGCAAGTCTGTATGAAATGCAGTGGCGAAAAGACAATGGCAACTGGAACAATACGCCGCGAACCGCGAACAAGGAAACGGAAGTTGAAGGTATTTATGCGGGTAACTATCACGTCAGGGTTAGATCTGTTGCATCAAATGGTTCTGCTTCAGGATGGTCTAAGATCGTAAGTGCAGAATTAACAGGTAAAGTTGGGGAACCTGAAAAGCCTATTAATTTGACGGCTTCCGATGATGAGGTATTTGGTATTCGCGTGAAATGGGGTATGCCGGAAGGAAGCGGAGATACTGCTTACATAGAGTTACACCAGGCGCCAAATGGTGCTGATGGTCATCCACTTGTTGATCAAGCTACGCTATTAACGCTTGTTCCATTCCCTCAATATGAATACTGGCATTCAATACTGCCAGCGGGTCATGTTGTATGGTACAAGGCAAGGTCAGTAGATAAAATCGGTAACGTGTCTGATTGGACTGATTTTGTACGAGGAATGGCATCAACTGACACAAGCATTATCACAGATCACATTAAGGTTGATATTGAAAATTCGGAGGGATACAAATGGCTTGAAGAGAACGCTATTAAATCAAACGATAAGATCCACAGTGCAGCAGAATCAATCATTCAGAATGCGTTAGCGAATGATACTGATGTTAGACGTATGCGAGTAGAGAACGGCAAGCGCAAAGCTGAATTCTTGCAGTCTCTAAAACTGATTGCAGATGAAACGGAAGCGCGAGTAACCGCAATCACTCAATTAAATGCACAATTTGACGAGAAATTAACGGCTCAAAATAGCGAATTGAGAGAGGTAATTGCTAACAGCACAGAAACCCTTAGCCAGCAGATTAATCAGCTTACAGCTACGTTTGAGGGTGAGATTAACGGCGTTAAGCAGGATGTAACGGCAAAAATCACGGAAGTTAATAAAGCAATCACCAATGAAGCTGAGGCGAGAGCTTCAGCAGATCAGGCGTTATCAACTCAGATTGGTGATACCCAATCAGCAGTGAATCAGAAACTTGATTCATGGGTTAACGCTGATAGCATAGGCGCGATGTATGGCGTTAAGCTTGGGTTGCGTTACAACGGCCAGGAGTATAGCGCTGGAATGGCTCTTTCACTTGTGGGTGACGGATCTGGAGTTAAATCGCAATTCCTGTTTGATGCTGGAAGGTTTGCTATCATTAACAACCAACAAAGCGGAGGTTTTACACTGCCGTTTGTAGTTGAGAATAACCAGGTGTTTATCAATAGCTTGCTTGTGAAAAACGGCTCTATTGGCAATGCTCAGATTGCGGATCAGATTAACTCTAACAACTGGCAGAGCGGCGCTGCTGGATGGATGATCAATAAGAATGGTTATGCCGAATTCAACCAGGTAACTGTAAGGGGTGGCGTTTATGCTTCATACGGATCATTCACTGGTAGCGTTTACGCGCAAGACGGATGGTTTAGGGGTACTGTTTACGCTGAAAAAATTGAGGGTGACGTTGCAAAGGCTGTTGTCCTTCCGTTTAACGGATCGGTTCACATTCCGGCGGTTAACTACAACAGACATCTTGCTATTCCATATGTTGGCGTTAACGCGAGAACTTATTCTGGTGGTACGTGGGGTAAAGGTACTGTCTGGATAGATTCAACTTATGGAGGAAGGTTATCAACAGCACAAACGGCGGCGCTTTCTGGTGGGAGCACTGGTTACATTCTTTTGCCAGCCGGTAACGCGACAACCCTAACATTCTCAGGAAGTCTTAATCATGCTGATGCTGTACCATTTGTAACCGTTCTTCTTTTCAAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ff57cda732e23c64d99c1191bbe338b70d2dc88042f0310179e5ea90dc2e25f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50