Protein

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Genbank accession
XXJ63508.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MATRLRGTLVDGLNKPIVNATVALLAKGNSLLVLSGSEAIFKTSATGTYDIIVQTGYYKVIIGPQGSEPYKAGEIAIYADSKEGTLNNYLTSWAPEELTPEVIAQVKDLVSQAETAKNASASSATKSEQERVKAEAAAKKAEDTANGMKDSIGLANRPRHIEDITGNPASFLGFIRILRATTVGYPSIASADNTLAGFISPMDGTPGYIGLFVGDVTGTVYSYRWVQTKGASWWKSALYSQIDRYNQHRAETNFTNQAGTAKILIENNKIWGAYDNENRRYIPLAIAQGGTGGTTDADARTNLRLGSNDTPQFRNLNLVTVADSAQAPSGIVSGYLNNSSGVQRCRYRIYSEIRGDNKAWLTLHLQSDTATNKYAGLSVDGNFQINGNFIGNALQLSDAPNSRINLQLDRFYQSANETVIYTPSRQAYMTISNNKTWGAYDAEARNFIPLPINRGGTGALTISDAKTNLQIPSVGGGDWLTYNAPPGVEAGKYYPVIIDMAYSSLYASGAFIDIKTRSAAGDDPMNCCTFNGFIRCGGWSDRKDGGYGYFNNYARNEIAMKCILSSSKDAERYVAIYVEGRGFPLQLRVPAFCEVTVPTSNFTYKNTTYAWGTANPATDSVAINTLFDFSLNRVGFYQATTEGNYYIGNGERIVLSNGMSVGEELSLTTPKVSFSGTIAAGNGVIADGTSVSNATFYSRYRVGDVLYGSEFRASENAGQIIVRDPTGGTAHQFFNFNLNGTFSAPAGLLSSTGVDWNGQINTVNKFYGIAGQVNTPENNVVYGGIHVGFSGNYAFQICGRKGKSFFRTFEAGVEGQWQQLVTKGNYGVGLIGTFKPEDGSSGFYTDSDGANTWSPANGGGFQSSYTQQRIFQFWMTSSSQGFIRFNDSGNAQASKTDKPWTTLQAAGTSDINFKRVHGEMDTDVALDNISKLEFVYFNYLSDGPEREIRRGIIAQQAQEVDPEYVHSAETSGKMTLDSNPLLLDALAAIQSLKKKDQDNKDRISKLETEVEELKTLVATLVNKEQPLP
Physico‐chemical
properties
protein length:1028 AA
molecular weight: 111560,72770 Da
isoelectric point:5,71302
aromaticity:0,10506
hydropathy:-0,34407

Domains

Domains [InterPro]
IPR013609
ATT
1–130
IPR013609 DC_1205 DC_0195
DC_1669
ATT
6–156
DC_1669 IPR030392
Coil
Unmapped
124–144
Coil IPR030392 Coil
XXJ63508.1
1 1028
Architecture
ATT
STR
ATT 1-156 | STR 224-1027 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ63508.1
1 1028
Domain Start End Length (AA) Confidence
N-terminal 1 460 460 0,5809
Central domain 461 688 229 0,6795
C-terminal 689 1028 339 0,9641
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-460
Central
461-688
C-terminal
689-1028

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RCIP0359
[NCBI] 		3440537 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ63508.1 [NCBI]
Genbank nucleotide accession
PV778520.1 [NCBI]
CDS location
range 18091 -> 21177
strand +
CDS
ATGGCAACTCGTTTACGTGGTACTTTAGTTGATGGTTTAAATAAACCAATTGTCAACGCTACAGTTGCGCTTTTAGCGAAAGGGAATAGCTTATTGGTATTGTCCGGTAGTGAAGCTATCTTTAAAACAAGCGCAACCGGAACATATGATATTATAGTCCAAACGGGCTATTACAAGGTTATCATCGGTCCGCAAGGCAGCGAGCCTTATAAAGCTGGTGAAATTGCCATTTACGCGGACAGTAAAGAAGGTACGCTGAATAACTATTTAACTTCCTGGGCACCGGAAGAGTTAACTCCGGAAGTTATTGCACAGGTTAAAGATTTAGTTTCACAAGCTGAGACAGCTAAGAATGCTTCAGCTTCGTCAGCTACTAAATCCGAGCAGGAACGAGTTAAAGCAGAAGCTGCTGCTAAAAAGGCGGAAGATACTGCTAACGGTATGAAAGATTCTATTGGTCTAGCTAACAGACCTCGTCATATTGAAGATATCACTGGAAATCCTGCAAGCTTCCTTGGGTTTATACGCATTCTAAGAGCCACTACCGTAGGCTATCCGTCTATTGCAAGCGCAGATAACACTTTAGCTGGTTTTATTTCCCCAATGGATGGAACGCCAGGCTATATTGGTTTATTTGTTGGCGATGTGACTGGAACAGTTTATAGTTACCGATGGGTACAAACGAAGGGTGCTTCATGGTGGAAAAGTGCTCTTTACAGTCAAATTGATAGATATAACCAGCATCGTGCGGAGACTAATTTTACAAACCAGGCGGGCACTGCAAAGATACTCATTGAAAATAATAAAATTTGGGGAGCTTATGATAATGAAAATAGGCGTTATATACCTCTCGCAATAGCTCAAGGCGGTACAGGAGGAACTACTGACGCGGATGCTCGTACAAACTTAAGACTTGGTTCTAACGATACACCTCAATTCAGAAACCTTAATCTTGTTACAGTAGCAGACTCCGCACAAGCGCCTTCCGGCATTGTGAGCGGTTATTTAAATAATAGCTCTGGAGTTCAAAGATGCCGCTACCGCATATATTCTGAAATAAGAGGTGACAATAAAGCGTGGTTAACCTTACACCTTCAATCAGACACAGCAACAAATAAATATGCTGGTCTAAGCGTTGATGGTAATTTTCAAATCAATGGAAATTTTATTGGTAATGCTTTGCAGTTGTCAGACGCTCCAAATTCCAGGATTAATCTACAGTTAGATCGTTTTTATCAAAGTGCTAACGAAACGGTTATTTATACTCCGTCTCGTCAAGCATATATGACAATTTCTAATAACAAGACTTGGGGCGCTTATGACGCGGAAGCTCGAAACTTCATCCCTTTACCTATTAATAGGGGAGGGACTGGTGCTTTAACAATATCCGACGCTAAGACTAATCTTCAAATTCCGTCTGTAGGTGGGGGTGATTGGTTAACTTATAACGCTCCTCCTGGCGTGGAAGCTGGAAAGTATTATCCAGTTATCATCGATATGGCATACAGCTCTTTATATGCTTCTGGTGCTTTTATAGATATAAAGACACGTTCTGCCGCTGGTGACGATCCAATGAACTGTTGCACTTTTAACGGATTTATTAGATGTGGTGGTTGGAGCGACCGAAAAGACGGCGGTTATGGTTACTTCAACAACTATGCAAGAAATGAAATTGCTATGAAATGTATTCTTTCTTCATCAAAAGATGCGGAAAGATACGTTGCAATATATGTTGAAGGTCGTGGTTTCCCTCTTCAATTGCGTGTCCCTGCATTCTGTGAAGTAACAGTACCAACATCAAACTTTACTTATAAAAATACAACCTATGCGTGGGGTACAGCTAACCCTGCAACGGATTCTGTAGCTATAAACACCTTATTTGATTTTTCATTAAACCGCGTTGGTTTTTACCAGGCCACAACAGAAGGTAATTATTATATCGGAAATGGGGAACGTATTGTTTTATCTAACGGAATGTCTGTTGGTGAAGAGTTAAGTCTAACCACACCTAAAGTGTCTTTCAGTGGAACCATTGCGGCTGGTAACGGTGTCATTGCAGATGGAACATCTGTATCCAACGCTACTTTTTATAGCCGTTATCGTGTTGGTGACGTATTATATGGCAGCGAGTTTCGCGCAAGTGAAAATGCTGGTCAAATTATAGTCCGCGATCCAACGGGTGGGACTGCGCATCAATTCTTTAACTTCAATCTCAACGGGACATTCAGCGCCCCCGCTGGTTTGCTATCTTCTACTGGAGTAGATTGGAACGGTCAGATTAATACCGTCAATAAATTCTATGGGATTGCTGGACAAGTTAACACACCAGAAAACAATGTGGTTTATGGTGGTATACATGTTGGATTCAGCGGCAACTATGCTTTCCAGATATGCGGAAGGAAAGGTAAATCCTTCTTCCGCACATTTGAAGCAGGAGTAGAAGGACAATGGCAACAATTAGTAACTAAAGGGAACTACGGAGTTGGTCTAATTGGAACTTTTAAACCGGAAGATGGTTCAAGTGGTTTTTACACTGATTCCGATGGGGCAAATACTTGGTCGCCCGCTAACGGAGGGGGTTTTCAATCTTCGTATACTCAGCAGCGAATATTCCAATTTTGGATGACATCAAGCTCGCAGGGGTTTATTCGTTTTAATGATAGCGGTAACGCTCAAGCTTCTAAGACGGATAAACCTTGGACAACACTTCAAGCAGCTGGCACATCGGATATTAACTTCAAACGTGTGCACGGTGAAATGGACACAGATGTTGCATTGGACAACATAAGCAAGCTTGAATTCGTTTACTTTAATTATTTGTCAGACGGTCCAGAGCGTGAAATCCGTAGGGGTATTATTGCTCAACAGGCCCAGGAAGTTGATCCTGAATATGTGCATAGTGCTGAAACATCCGGAAAAATGACTTTGGATTCTAACCCATTGTTATTGGATGCATTAGCTGCAATACAATCCCTCAAGAAAAAGGATCAAGATAATAAAGACCGTATTAGTAAACTTGAGACTGAAGTCGAGGAACTTAAGACGTTAGTTGCTACGCTTGTTAATAAAGAGCAACCATTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7275f3b7d02a41c97d7e0c22ebd4ebd1b017361a6c4f8bfbbfe2fedcd84d0c3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50