Protein

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Genbank accession
XRJ26502.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTDYLSINEFPGNGAIMQVEVQFAGNTPDVGSGAVPYFKPEDVKAQFFTPATSTTPQVVEDKPLGYVGPNTFVTLEPVPVGKILRVYRETEDRFSLVNFVALQNVTERDLDALARQTVYLVEEAKDAAQFAIDTAREAIKYATASTKVADDALALATEAKQLASAAVVTSNSASQVANNALQNANAAKVAADAAEQHATNVETLASQAQTAAADAETKATRAETKADQATVTANAIDGKATTAINTANAATQTANSAKATAEGIEGKANQAISTANAATDTANQAKATADAVDGKATTALANANTAIGTANQANATAADALDAANAANANVAGKVNRSGDLMTGVLNNGVGFQARGTGGAKTGPYFELHWPNQTASMWYLRSDGFTVLAQTGGSGQSAADNLSVNNATGRLSTRGDIAANGNISTPGTMFANNWSPASGTTMIVNGVLQSTLDMQSLNGVFRCRAPAGANAHFFFENPNGTERVLMYADTASNLNIRTTGGATAMTIRNSDKGMTLTGPFNGNSTIYAAGRIQSGQDFLSASRVYADGGGSWIGDAGNLYGGTWGGYLSSWIQANVVTLAAFRARSAEYFSANQIGSYCFLQNVSGVNQGQNGLLDGPNLRLSSHNNVSGAAPEGTWRQLGWCNAGGVSVWIRVY
Physico‐chemical
properties
protein length:655 AA
molecular weight: 67799,88300 Da
isoelectric point:5,05221
aromaticity:0,07176
hydropathy:-0,20198

Domains

Domains [InterPro]
DC_1152
ATT
12–279
DC_1152 DC_0749
Coil
Unmapped
205–225
Coil
XRJ26502.1
1 655
Architecture
ATT
RBD
ATT 12-279 | RBD 371-644 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRJ26502.1
1 655
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9921
Central domain 244 442 200 0,2667
C-terminal 443 655 212 0,8885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-655

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage P-2FD
[NCBI] 		3410912 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas psychrophila
[NCBI] 		122355 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRJ26502.1 [NCBI]
Genbank nucleotide accession
PV256515 [NCBI]
CDS location
range 4329 -> 6296
strand -
CDS
ATGACTGACTATTTGTCGATCAACGAATTCCCCGGCAATGGCGCCATCATGCAAGTCGAAGTCCAGTTCGCTGGTAACACTCCCGACGTGGGTTCTGGTGCTGTGCCGTATTTCAAACCCGAGGACGTGAAGGCTCAGTTCTTCACGCCTGCTACTTCGACCACTCCGCAGGTCGTAGAGGACAAGCCGCTGGGCTATGTCGGGCCGAACACTTTCGTCACGCTGGAGCCTGTGCCTGTCGGCAAGATCCTGCGGGTGTACCGCGAAACCGAAGATCGCTTCTCGCTGGTCAACTTCGTTGCCTTGCAGAACGTTACCGAGCGCGACCTTGACGCACTGGCTCGCCAGACTGTGTACCTTGTCGAAGAAGCCAAGGACGCGGCGCAGTTTGCTATCGACACCGCCCGAGAGGCGATCAAGTACGCTACAGCGTCCACCAAGGTTGCGGATGATGCTCTCGCACTGGCTACCGAGGCCAAGCAACTGGCGTCGGCGGCGGTAGTCACTTCGAACTCCGCTTCGCAGGTTGCTAACAACGCTTTGCAGAACGCGAATGCGGCGAAGGTCGCTGCTGACGCGGCTGAGCAACACGCCACCAACGTAGAGACGCTGGCCTCGCAGGCACAGACTGCTGCCGCTGACGCTGAAACCAAAGCCACCCGCGCCGAAACTAAGGCGGATCAGGCTACAGTTACCGCCAACGCTATCGACGGCAAGGCGACCACTGCAATCAACACCGCCAACGCAGCAACTCAGACGGCCAACTCGGCTAAGGCTACCGCCGAGGGTATTGAGGGCAAAGCGAATCAGGCAATCAGCACAGCGAACGCCGCAACCGACACCGCCAACCAAGCCAAGGCCACTGCCGACGCAGTTGACGGGAAGGCCACGACTGCGCTGGCGAATGCCAACACCGCAATCGGCACAGCCAACCAAGCTAACGCCACCGCAGCGGATGCTCTCGACGCCGCCAATGCGGCAAACGCCAACGTGGCCGGTAAAGTCAACCGCTCCGGCGACCTGATGACCGGTGTGTTAAACAACGGCGTGGGTTTCCAAGCTCGCGGTACTGGCGGGGCCAAGACCGGGCCGTACTTCGAACTGCACTGGCCCAACCAGACAGCTTCGATGTGGTATCTCCGGTCGGACGGCTTCACCGTGCTGGCACAGACTGGCGGGAGCGGGCAGTCGGCTGCGGATAACCTCTCGGTTAACAACGCAACCGGTCGGCTAAGCACTCGCGGCGACATCGCGGCTAACGGGAATATCTCTACTCCCGGCACGATGTTCGCTAATAACTGGTCGCCTGCATCCGGCACTACGATGATCGTCAACGGCGTTTTGCAGTCCACACTAGACATGCAGAGTCTCAATGGTGTGTTCCGCTGCCGTGCCCCTGCTGGCGCCAACGCGCACTTCTTCTTCGAGAACCCCAACGGCACTGAACGTGTGTTGATGTACGCCGACACGGCGAGCAACCTCAACATCCGGACAACTGGCGGCGCCACTGCCATGACCATTCGGAACTCGGACAAGGGCATGACCCTTACTGGCCCGTTCAATGGTAACAGCACCATTTACGCAGCGGGGCGTATCCAATCCGGTCAGGACTTCTTGTCCGCTAGTCGGGTGTACGCTGACGGAGGCGGTAGCTGGATCGGCGACGCAGGTAACCTGTACGGCGGCACATGGGGCGGTTACCTGTCGAGCTGGATCCAAGCCAACGTCGTCACCCTCGCGGCCTTCCGGGCACGTTCGGCGGAATACTTCTCGGCCAACCAGATCGGCTCGTACTGCTTCTTGCAGAACGTGTCCGGCGTGAACCAAGGTCAGAACGGTCTACTTGATGGGCCTAATCTGCGCCTGTCCTCTCACAACAACGTGTCGGGCGCCGCACCAGAAGGCACATGGCGTCAGTTGGGCTGGTGCAACGCTGGCGGCGTGTCCGTCTGGATTCGTGTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5c54c514b95bb535adbd8cda6a0efd7dd7d307c5c579da5454e0fb5eb720fe2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6938
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50