Protein

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Genbank accession
YP_008239670.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MKGPQPGIGLGSNSGSSSGSSRVIYGGVVSASVNPMLPGWGSPPAEATVLGTVTDEFVDAPQNIPAGEYRGTIVKQIAANFIDLTYTTLSGRVYKKLMFLDNGQQNSAWEEVGTSAKEAIWTLKNNSTTTAATTTGPAKFQANMSLFNAVETDFLGDLNIGSGSDFEFTVGVPRAFEIQMHGAIEDAANATQKIAIALYDSATNDHMTGSMQILSPASTWSSANEYTFNCIGFARLDPNNTVSLQVMVDANAALVLKECIVVLKPIES
Physico‐chemical
properties
protein length:268 AA
molecular weight: 28274,41690 Da
isoelectric point:4,60199
aromaticity:0,07836
hydropathy:-0,02948

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPMS1
[NCBI] 		1233488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008239670.1 [NCBI]
Genbank nucleotide accession
NC_021776.1 [NCBI]
CDS location
range 7783 -> 8589
strand +
CDS
ATGAAAGGACCACAACCAGGAATAGGCCTAGGAAGCAACTCAGGAAGCAGCTCAGGTTCTAGCAGAGTAATCTACGGAGGCGTTGTTAGCGCCTCTGTCAACCCTATGCTGCCTGGCTGGGGCTCGCCTCCAGCTGAAGCAACAGTACTGGGCACTGTTACAGATGAGTTTGTCGATGCACCTCAAAACATCCCTGCTGGTGAATACCGAGGCACTATTGTAAAGCAAATAGCGGCTAACTTTATAGACTTAACGTATACAACGCTAAGTGGTAGAGTCTACAAAAAGCTTATGTTTCTAGACAATGGCCAGCAGAACAGCGCGTGGGAAGAGGTAGGCACGTCAGCTAAAGAAGCGATATGGACGTTAAAGAACAACTCTACCACCACGGCGGCAACTACTACTGGACCAGCGAAGTTCCAAGCTAATATGAGTTTGTTTAATGCGGTAGAAACAGACTTTCTGGGCGACCTAAACATAGGCTCAGGCAGCGACTTTGAGTTCACAGTAGGTGTCCCTCGAGCTTTCGAAATACAGATGCACGGAGCCATAGAAGACGCTGCTAATGCTACGCAAAAAATCGCAATAGCCCTCTATGACTCTGCTACTAACGACCACATGACTGGGTCTATGCAAATACTTAGTCCAGCATCTACTTGGTCTAGTGCCAATGAGTACACGTTTAACTGCATCGGTTTTGCTAGGCTAGACCCAAATAATACAGTGTCTCTACAAGTGATGGTAGATGCTAATGCAGCGCTAGTTCTAAAAGAGTGTATAGTTGTGCTAAAACCTATAGAGTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
676f7c61e0c731288277671926d45003b5287d917309a55a76325d6de8bdb6f3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50