Protein

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Genbank accession

ANA49268.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,96

Protein sequence

MIPHIHGMKGGSQKPHTPVETPNNLLSVAYAKILMAVAEGELAGNPTAQDIFLDGTPLANADGSFNFDGVKWEWRSGTQHQTYIQGMPEVATEYNIGTELTNVTSWTRTVTTPGLDAVRITMQFPALLKQETNGDTNGTSVEFAIDMSPIGQPLTEVARYTVTGKTNQAYEKTYRVDLPASTRGWTVRVRRVTPDSTSSMLQNKTVVKSYTEVKDLKQTYPHTALLYVEFDSRTFGGGNIPKISVRTKGRIVQVPSTYDPEARTYTGVWSGDFKWAWTNNPIWVYYDLVTQDRFALGHKITPDMVDKWALYELAQYCDVMVDDGTGFGGKVPRHTCNVYIQEQQDAYQVLRDIAGIFNGMTYWDGNKMVAVADKKEDLTNAPIFSRANVVNGRFDYPAADDKSIYTSALVSFDDPDNHYESTVAATWERSQMQRWGGDRQTNLSAIGCTSRSEAQRRGKYVLLTNMYNRMVKFRTGLQGLDQAVLPGSIIHVVDPLMGGRPFTGRVAAVVNQRQIYLDRDSGAKVGDTLYVTLRNGKTEGRQIMRIGGNSVTVSTAYTQDPPINSVWYLESSDLKSQLFRVTKVTNPDPAVFEIEGVEYNESKYDAIDNGARLESRPINQVPDRMQQAPASVNITSRTYVEQTMAVTTMTISWPQTPNAVSYEVQWRVGDGDWVNVGVTGANEIDIKGIYAGEYLARVRARNSIGIGSVWTTSTLTSLAGKAGKPPTIASLTTTPMFFGIRLDWTFPPGATDTLKTEIMYSQNANFTSAIKLGDFSYPLDYNEMHGLKAGQKFWFWTRLTDRTGNVGDWYPATNLPGIVGTAMINDDGQYNDYLAGMIGETMLDKALYERLELIDGPSPDSLKNQITSVANRVTINEDRITDAENSITEVTGDLNQYKTQTNNRLTAAEASITKVNGDLNTFKVETNAKITAANQKIDGINASLTTKINDTNTKVDNINTALGQRIDATNTALNAAVTDLQDQIDNISDALLYDPTKTYVKGDVVRMNNRLYQALGNVPLNSPPPNAALWQDIGSYGETINNLTIKVDKNTQDIGLIDGKLTSTVESLDLMRAAYRQDDGEGSLQDALRGWESEATIATEMLTRANEDEALAQRITTMSARVDESEAKINSMEQTIATNESAMAQRVYSLQAEVMDNRTEILSLNKVVAETNQVTAERLDSMSVAINETKGSISSLSEVVATSNNVLVQQVNTLSAELKNSNAIISDITTVIIDNNQALVERVNQIDTRVGTAETNITTLTQTVTTNNNATNLRIDNLTATVGQNTAKIGTLETTVANEKTATAQRFETMQTEVDGNKSAITSLTETVTTKDTATNQRIDSLTTKVNDNSAAITTLSETVTDLESATASQITQLTTRVGKAESDITTLAQTVTTKDTATNLRIDTLTSKVDGNTAKIGTLETTVATEKTATAQRFATMQTEVDGNKSAISTLTETVTTKDTATNQRIDTLTTTVNGNTSAITNLTKTVTDNNSATVSQINALTTRVGTTETNITTLTQTVNTKDAATNLRIDNLTATVNQNKADISTMQTTIVNNESATAQKFQTMQAEVNANKANISTLETTVATNNTAINTRVDNLTATVDGNTSKITTLTETVSTLESSVASIQTDISAIHTVGRDDDGEGDLNAALGDWGTQANIATEQKVRADANEAMASIITDLSAKFTTDIASMQATIHEESVARATADEALGQRIDTVQANFVTEQGRVNGLIQTEQTTRANADIALGQRIDTVQATAGNNSAAIQTLTSAQASTDGKVNASWQVKMELNAQGQYVAAGIGLGIENGPAGLQSQFLVRADRFAVVNGVNGTTSAPFVVQGGQVFIADAMINKATITNAIIGSTLSSQYSTTWGPALPTLVISFAQDGAIVMRNQVRPNTYATYTPDGVNIVVDGVTRVRMGTWQ

Physico‐chemical properties

protein length:	1922 AA
molecular weight:	208693,90190 Da
isoelectric point:	4,86214
aromaticity:	0,05931
hydropathy:	-0,35937

Domains

Domains [InterPro]

DC_0129
STR
5–960

DC_0129 Coil Coil DC_2230 DC_0292 DC_0292 DC_0292 DC_0068

IPR053171
Unmapped
5–960

IPR053171 G3DSA:2.10.10.20 DC_1382 DC_0292 DC_0292 G3DSA:1.20.5.340 IPR015406

IPR055385
ATT
91–215

IPR055385 IPR013783 G3DSA:1.20.5.340 DC_2230 G3DSA:1.10.287.1490 DC_0372

IPR003961
STR
628–707

IPR003961 Coil

IPR003961
STR
628–721

IPR003961

IPR036116
STR
646–717

IPR036116

ANA49268.1

1 1922

Architecture

STR

ATT

STR

ATT

STR

STR 5-90 | ATT 91-215 | STR 216-960 | ATT 970-1036 | STR 1037-1880 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0129	STR	DC_0129	5	960	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR053171	Unmapped	-	5	960	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	91	215	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR013783	STR	IPR013783	627	718	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	628	707	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	628	721	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	646	717	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	858	926	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
Coil	Unmapped	-	880	900	Coils	Coil	-	-	-	-
Coil	Unmapped	-	970	990	Coils	Coil	-	-	-	-
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	970	1036	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
DC_2230	STR	DC_2230	984	1159	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
Coil	Unmapped	-	1115	1142	Coils	Coil	-	-	-	-
DC_2230	STR	DC_2230	1153	1227	Novel HMM	DC_2230	Central	Low	Positional only	32 proteins / 32 hits
DC_1382	STR	DC_1382	1217	1301	Novel HMM	DC_1382	Central	Low	Positional only	36 proteins / 36 hits
G3DSA:1.10.287.1490	STR	G3DSA:1.10.287.1490	1225	1398	Merged direct domain	G3DSA:1.10.287.1490	Central	Low	Positional only	5 proteins / 5 hits
DC_0292	STR	DC_0292	1283	1365	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
DC_0292	STR	DC_0292	1353	1424	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
DC_0292	STR	DC_0292	1413	1497	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
DC_0292	STR	DC_0292	1483	1555	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
DC_0292	STR	DC_0292	1540	1642	Novel HMM	DC_0292	Central	Low	Positional only	33 proteins / 33 hits
G3DSA:1.20.5.340	STR	G3DSA:1.20.5.340	1559	1649	Merged direct domain	G3DSA:1.20.5.340	Central	Low	Positional only	38 proteins / 38 hits
DC_0372	STR	DC_0372	1641	1695	Novel HMM	DC_0372	Central	Low	Positional only	8 proteins / 8 hits
DC_0068	STR	DC_0068	1687	1880	Novel HMM	DC_0068	Central	Low	Positional only	24 proteins / 24 hits
IPR015406	RBD	DC_0135	1762	1865	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage phiPMW [NCBI]	1815582	Uroviricota > Caudoviricetes > Plaisancevirus >
Host	Pseudomonas putida [NCBI]	303	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Genbank protein accession

ANA49268.1 [NCBI]

Genbank nucleotide accession

KU862660.1 [NCBI]

CDS location

range 61677 -> 67445
strand +

CDS

ATGATCCCTCACATCCATGGTATGAAAGGTGGTTCTCAGAAACCACACACTCCTGTAGAAACACCTAACAACCTCCTGTCGGTTGCTTATGCCAAGATTCTTATGGCAGTTGCAGAAGGTGAGCTTGCTGGTAACCCAACTGCTCAGGACATTTTCCTCGACGGCACTCCTTTGGCTAACGCTGACGGTTCTTTTAACTTCGACGGTGTAAAGTGGGAGTGGCGTTCTGGTACTCAACATCAGACTTACATCCAAGGTATGCCAGAAGTTGCAACTGAGTACAACATTGGTACTGAGTTGACTAACGTAACTAGCTGGACTCGTACGGTAACCACCCCGGGTCTTGACGCTGTTCGTATCACGATGCAGTTCCCTGCTCTGTTGAAACAAGAAACAAACGGTGATACCAATGGTACTTCTGTTGAGTTTGCAATCGACATGTCTCCAATTGGTCAACCGCTTACTGAAGTTGCTCGTTATACCGTAACTGGTAAAACCAACCAAGCTTATGAAAAGACTTACCGGGTAGACCTCCCAGCTAGTACTCGTGGGTGGACTGTTCGGGTTCGTCGTGTAACACCAGACAGTACGTCGAGTATGCTCCAGAACAAGACTGTTGTAAAGTCCTATACTGAAGTGAAAGACCTGAAGCAAACCTACCCACACACCGCTCTGCTGTACGTTGAGTTCGACTCCCGTACCTTTGGTGGTGGCAACATCCCTAAGATTAGTGTTCGCACCAAAGGTCGTATCGTTCAAGTACCGTCCACGTATGATCCTGAGGCTCGCACTTACACAGGTGTCTGGTCTGGTGACTTCAAATGGGCATGGACAAACAACCCTATTTGGGTTTACTATGACCTCGTTACTCAAGATCGTTTCGCACTGGGTCACAAGATCACACCAGACATGGTGGACAAGTGGGCGCTGTATGAGTTGGCACAATACTGTGACGTAATGGTTGATGATGGTACTGGTTTTGGTGGTAAAGTTCCACGCCACACCTGTAACGTTTATATCCAAGAACAGCAAGATGCTTATCAGGTACTTCGTGATATTGCAGGCATCTTCAACGGTATGACCTACTGGGATGGCAACAAGATGGTTGCTGTTGCTGACAAGAAAGAAGACCTGACGAATGCTCCAATCTTCTCTCGTGCTAACGTTGTCAATGGTCGTTTCGATTACCCAGCAGCAGACGATAAGTCGATTTACACAAGTGCTCTGGTTAGCTTTGATGATCCAGACAACCACTATGAGTCCACTGTGGCTGCAACTTGGGAACGTTCTCAGATGCAACGTTGGGGTGGTGATCGTCAGACCAACCTTAGTGCAATCGGTTGCACCTCCCGTTCTGAGGCTCAGAGACGCGGTAAGTACGTCTTGCTGACCAACATGTACAACCGTATGGTTAAGTTCCGTACTGGCCTTCAAGGGCTTGATCAAGCTGTTCTACCGGGTAGTATCATCCATGTAGTTGACCCACTGATGGGTGGTCGTCCGTTTACTGGTCGAGTCGCTGCTGTAGTCAACCAGCGTCAGATCTACCTTGATCGTGATTCTGGTGCAAAAGTTGGTGATACTCTGTACGTTACCCTGCGTAATGGTAAAACAGAAGGTCGTCAGATCATGCGCATTGGTGGAAACTCTGTCACCGTTAGTACTGCATACACTCAAGATCCACCGATCAACTCTGTGTGGTATCTTGAATCGTCCGACCTCAAGTCTCAACTGTTCCGTGTGACTAAGGTAACAAACCCAGATCCAGCAGTATTTGAGATTGAGGGTGTAGAGTACAACGAATCCAAGTATGATGCAATCGACAACGGTGCTCGACTGGAATCTAGACCAATCAACCAAGTACCTGACCGCATGCAGCAAGCACCTGCATCCGTTAACATCACTTCCCGCACATATGTCGAACAAACAATGGCGGTAACCACTATGACCATTTCTTGGCCACAGACACCAAACGCTGTTAGTTATGAAGTACAGTGGCGTGTTGGCGATGGTGACTGGGTAAACGTTGGCGTAACTGGTGCTAACGAGATTGACATTAAAGGTATCTACGCTGGTGAGTATCTGGCTAGGGTTCGTGCTCGAAACAGCATCGGGATTGGTTCTGTATGGACAACATCCACGCTTACAAGCCTCGCTGGTAAAGCTGGTAAACCGCCAACCATTGCAAGCTTGACGACAACCCCAATGTTCTTCGGTATTCGTTTGGACTGGACATTCCCACCGGGAGCTACAGACACACTGAAGACTGAAATCATGTACAGCCAGAATGCAAACTTTACATCTGCAATTAAACTTGGTGACTTCTCCTATCCTCTGGATTACAATGAGATGCACGGTTTGAAAGCTGGTCAGAAGTTCTGGTTCTGGACTCGGTTGACAGACCGCACCGGTAACGTTGGTGACTGGTATCCAGCAACTAACCTCCCGGGTATTGTTGGTACAGCAATGATCAACGACGATGGTCAATACAATGACTATTTGGCTGGTATGATCGGTGAAACAATGCTTGACAAAGCACTGTATGAGCGTCTAGAATTAATTGATGGACCTAGCCCAGATAGTTTGAAAAACCAGATTACTTCTGTGGCAAATAGGGTAACCATCAACGAAGATCGTATTACTGATGCAGAGAACAGCATTACCGAAGTTACTGGTGATTTGAACCAGTACAAAACACAAACAAACAATCGACTGACTGCTGCTGAGGCAAGTATCACTAAGGTGAACGGCGACCTCAATACATTCAAGGTGGAAACAAACGCCAAGATTACAGCAGCCAACCAAAAGATTGATGGTATTAACGCCTCGTTGACAACTAAGATCAACGATACAAACACCAAAGTTGATAACATTAACACTGCTCTGGGCCAGCGAATTGATGCGACTAACACCGCATTGAATGCCGCTGTGACTGACTTGCAAGACCAGATTGATAACATCTCGGATGCTCTGCTCTATGACCCAACCAAGACTTACGTCAAGGGTGATGTTGTTCGTATGAACAATCGGTTGTATCAGGCACTTGGGAACGTACCGCTGAACAGCCCTCCACCTAATGCAGCACTGTGGCAGGATATCGGTTCGTACGGTGAAACAATCAATAACCTCACAATTAAGGTTGACAAGAACACCCAGGATATCGGTCTGATTGACGGTAAACTGACTAGTACTGTTGAGTCCCTTGACCTTATGCGTGCAGCGTACCGTCAAGATGATGGTGAAGGTTCTCTGCAAGATGCATTGCGTGGGTGGGAAAGTGAGGCTACAATTGCAACAGAGATGCTTACTCGTGCGAACGAAGACGAAGCTCTGGCACAGCGTATCACCACAATGTCCGCTCGTGTTGATGAGAGTGAAGCCAAGATCAACTCTATGGAACAAACGATTGCAACCAATGAATCGGCAATGGCCCAACGAGTGTACTCGCTTCAAGCTGAAGTCATGGATAACCGTACTGAAATTCTCTCCCTGAACAAGGTAGTGGCTGAAACTAACCAAGTTACAGCAGAACGTTTGGACTCCATGAGTGTTGCGATTAACGAAACAAAAGGTAGCATCAGCAGCCTGAGTGAAGTGGTGGCAACTAGCAACAATGTATTGGTTCAACAAGTAAACACACTGAGTGCTGAGCTTAAAAACTCAAACGCAATAATCTCTGATATCACAACAGTTATCATTGATAACAACCAAGCTCTCGTTGAGCGGGTGAATCAGATTGATACTCGTGTAGGAACTGCTGAGACTAATATTACTACTCTCACCCAGACAGTTACAACAAACAACAACGCAACTAACCTTCGGATTGACAATCTGACTGCAACAGTTGGTCAGAACACGGCTAAGATCGGAACATTGGAAACAACGGTTGCTAACGAAAAGACAGCGACTGCACAGCGTTTCGAGACGATGCAAACCGAAGTTGATGGTAACAAGTCGGCAATCACAAGTCTCACTGAGACAGTGACAACAAAAGATACGGCTACCAACCAGCGTATTGACAGCTTGACTACCAAGGTAAATGACAACTCTGCTGCAATCACAACTCTGAGTGAAACTGTGACGGATCTTGAATCGGCAACAGCTTCCCAGATCACTCAACTTACAACCCGTGTTGGTAAAGCAGAGAGTGACATCACAACTCTTGCGCAGACCGTAACCACAAAGGACACAGCGACCAACCTTCGGATTGACACGCTTACTTCCAAGGTTGACGGTAACACTGCCAAGATTGGAACTCTTGAAACTACTGTGGCAACCGAGAAGACAGCAACCGCACAACGGTTCGCTACAATGCAAACTGAGGTTGATGGTAACAAATCAGCAATCTCGACATTGACTGAAACGGTAACCACAAAGGACACAGCAACTAACCAACGGATCGATACCTTGACAACTACGGTCAATGGTAACACTTCGGCAATCACTAACCTGACTAAGACTGTTACAGACAACAACTCTGCGACGGTAAGTCAGATCAATGCGTTGACTACCCGGGTAGGTACTACTGAAACAAATATTACCACATTGACTCAAACAGTCAACACCAAAGATGCAGCAACAAACCTGCGTATTGACAATCTGACCGCAACTGTTAACCAGAACAAGGCAGATATCAGCACTATGCAAACAACAATCGTGAACAACGAGTCGGCAACGGCTCAGAAGTTCCAAACAATGCAAGCTGAAGTCAACGCAAACAAGGCGAATATTAGTACACTGGAAACAACAGTTGCTACTAACAATACAGCAATTAACACTCGTGTTGATAACCTCACCGCTACTGTTGATGGAAACACTTCTAAGATCACAACTCTGACGGAGACTGTATCCACGCTGGAATCGTCTGTGGCAAGTATCCAAACTGACATTAGCGCAATCCACACAGTGGGCCGTGACGATGATGGTGAGGGTGACTTGAATGCTGCTCTGGGTGACTGGGGAACGCAGGCAAACATTGCAACTGAACAGAAGGTTCGTGCGGATGCTAACGAGGCTATGGCTTCGATCATCACTGACCTGAGTGCTAAGTTTACAACCGATATTGCATCCATGCAAGCGACCATCCACGAAGAGAGTGTTGCTCGGGCAACCGCTGACGAAGCCTTGGGTCAGCGGATTGATACTGTACAAGCTAACTTTGTAACTGAGCAAGGTCGAGTTAACGGTTTGATCCAAACTGAACAGACCACTCGTGCAAATGCTGACATTGCTCTCGGGCAGCGTATCGACACTGTACAGGCAACTGCCGGTAATAACTCTGCTGCAATTCAAACGCTGACATCTGCTCAGGCTAGCACTGACGGTAAGGTGAATGCTTCGTGGCAGGTTAAAATGGAGTTGAACGCACAAGGTCAGTACGTAGCTGCTGGTATTGGTCTGGGTATTGAGAACGGTCCAGCCGGTCTTCAGTCTCAGTTCCTTGTAAGGGCAGATCGGTTCGCAGTTGTAAACGGTGTCAATGGTACAACGTCTGCTCCATTTGTTGTTCAAGGTGGACAGGTGTTTATTGCCGATGCAATGATCAACAAAGCAACAATCACAAACGCAATTATTGGTAGCACCCTCTCGTCCCAGTATTCAACCACTTGGGGTCCGGCATTGCCAACCTTGGTAATCAGCTTCGCGCAGGATGGTGCAATTGTAATGCGTAACCAAGTCCGACCAAACACTTACGCAACATATACGCCTGATGGTGTCAATATTGTTGTTGACGGTGTTACTCGTGTTCGGATGGGTACATGGCAATAA

Genome Context

Tertiary structure

PDB ID

62e5c8e8cc415258254fedd0cc45130df0afea77e4aeec7ba3ced3d9e9967700

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6532

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Characterization of pf16 and phiPMW: Two novel phages infecting Pseudomonas putida PpG1	Magill,D.J., Krylov,V.N., Allen,C.C.R., McGrath,J.W., Quinn,J.P. and Kulakov,L.A.	2017-09-06	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature