Protein

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Genbank accession
AHI61253.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
Protein sequence
MPPVIIGVAVGVAASVAGATLLTAVAIGMAAAGLYAVATMDIPKTPGTSPSNAKQTIRSPNQPFRAIVGTAMVGGPMLFAEEYSNSIDVQEEYEHCTYYHGGKHCEKRTRTVTKTNKYLHLVIPLACHPCEDVVEVYFGDDKQDNWDHEYWKINVIKGDQQSVADLPKMLTDVPSWTDKMVGKGVTFVHVALRHSAEHFPNGLPNIKCLVQGMKLDTPMFKGFTNNAAAVVYHFLRHHFRAKESEINTLSFRDAYSVCGELMYSEQPAPDPDDPSAPTPAVPIRYAIDGIYDFDESYENIMNKMLAACGGKLLYTNGQYHLHVAAYRGPAPQDQVVKLSDLNGPIQIVPDTPLGDRINTVKGQHLDPNNFYQQVDFEPVTHPDYVAEDGEELTKDLDLEYVLNPHQAYRLANIVLKENRYGLTVTVPMNLRGFKFNAGLPVRFDEKEFGYDQLEFEVASWKLTDGKGIELVLKQTAAEIFDDAVAVVTPKPPSTNIPDPKFCHPVQNLIFQPFLDDGVYDGLLLWSHPDIDNVREFEVVVTSTDGQIFKYQPGKALELYLDNMPKSDYNITVIGYNIYGAPSAPVSIQADIGSTKPITNVVFEADNFEMNIIPKVSGILPSNTTFLFYRANNVNNPSPTDVTLLGQGVTYVDVGLIPNTAYKYYVQVTNSATFSELYGPYSAKTTDNPDDIYDFIKDQIPGQYTWVVYASDAFGADISKTYNPAIHHFEGRAYNKGTETPSLNPLDYTFIRIGEFISPEDQDILDNLAQGKLPDGSADLVKPSDVLFKPGDKVTGTNIADGAISTPKLTANAVTSDKIIANAVTTAKIAAGAVTATQIAANAITASKILAGAITAEKIAANAITADKIAVTVVSPINNFSEFGDTRGWLLPPSAVLSEAISLNGKKARTLKFVNSPTAYRELKSDKFTVDHNAIYEVRFSYYSGQTSQGVKTALRLKAYNSANSEVVSDRYHFDTLAKADTTPSPDFWAGSVVNGWRHLVSYIVGASADVNSVPKAINSTYVIKLGADARTLALQSITWPNANIVDTHIYSPSIVKVGSGIIVANEIRANSLITSPVIKGGTVEGVEVIGSTVKGGKGLFGPESGAPYEGHHTRIGTDGTIDTDRLRLNHGKTGSRLEITADAVRVYEGSLLRVVLGKLS
Physico‐chemical
properties
protein length:1160 AA
molecular weight: 126331,17460 Da
isoelectric point:5,38881
aromaticity:0,09138
hydropathy:-0,17233

Domains

Domains [InterPro]
DC_0187
STR
1–982
DC_0187
IPR036116
STR
645–689
IPR036116
AHI61253.1
1 1160
Architecture
STR
STR 1-982 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHI61253.1
1 1160
Domain Start End Length (AA) Confidence
N-terminal 1 1084 1084 0,7253
Central domain 1085 1149 66 0,4531
C-terminal 1150 1160 10 0,9767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1084
Central
1085-1149
C-terminal
1150-1160

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage SHOU24
[NCBI] 		1414739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHI61253.1 [NCBI]
Genbank nucleotide accession
KF623293.1 [NCBI]
CDS location
range 43898 -> 47380
strand -
CDS
ATGCCACCAGTGATAATCGGTGTAGCCGTAGGCGTAGCTGCTTCGGTAGCAGGTGCTACACTTCTAACCGCAGTAGCAATCGGTATGGCCGCTGCTGGGTTGTATGCTGTTGCTACTATGGACATCCCAAAAACTCCAGGCACAAGCCCATCAAACGCCAAGCAGACCATACGATCGCCTAACCAGCCATTCAGGGCAATAGTAGGCACTGCAATGGTTGGCGGACCTATGCTGTTCGCTGAAGAGTACAGCAACTCGATAGATGTTCAGGAAGAGTACGAGCACTGCACTTACTACCACGGCGGCAAGCATTGTGAGAAAAGAACTCGTACGGTAACCAAAACAAACAAGTACTTGCACCTTGTAATACCTTTAGCGTGCCACCCTTGTGAAGATGTCGTTGAGGTTTACTTTGGTGACGACAAACAAGACAACTGGGATCACGAGTATTGGAAGATAAACGTAATTAAAGGCGATCAGCAAAGTGTTGCCGACCTTCCTAAGATGCTTACCGATGTCCCGTCATGGACGGATAAAATGGTAGGCAAAGGTGTAACTTTTGTGCATGTAGCACTGCGCCATAGCGCTGAGCACTTCCCTAACGGCCTGCCTAATATAAAGTGTTTGGTGCAAGGGATGAAGCTTGACACTCCTATGTTTAAAGGCTTCACAAACAATGCCGCTGCTGTGGTATACCACTTTCTTCGTCATCACTTCAGAGCTAAAGAGAGTGAGATCAACACACTATCATTCAGAGACGCATATTCAGTTTGTGGCGAACTGATGTACTCTGAGCAGCCTGCGCCAGATCCTGATGATCCTTCTGCACCTACTCCTGCTGTCCCTATCCGCTACGCAATAGACGGCATCTACGACTTTGACGAGTCGTACGAAAACATCATGAACAAGATGCTTGCTGCATGCGGAGGTAAGTTGTTGTACACCAACGGCCAGTACCATTTGCACGTTGCAGCGTACAGAGGACCAGCACCGCAAGACCAAGTTGTAAAGCTTTCAGACCTTAACGGTCCTATACAAATAGTCCCAGATACCCCGTTAGGCGATCGAATAAATACGGTGAAAGGGCAGCATTTAGACCCTAACAACTTCTACCAACAAGTAGACTTTGAGCCTGTGACCCACCCTGATTACGTGGCAGAAGACGGAGAAGAGCTTACAAAAGACTTAGACCTTGAGTACGTCCTAAACCCACATCAGGCTTATCGCCTCGCTAACATCGTACTTAAAGAGAACAGATATGGTCTAACTGTCACAGTCCCTATGAACTTGAGAGGGTTTAAGTTCAACGCTGGTCTTCCTGTACGCTTCGACGAGAAAGAGTTTGGATATGACCAGTTAGAGTTCGAAGTTGCCTCTTGGAAGTTGACAGACGGTAAAGGTATCGAGTTGGTTCTTAAACAGACTGCGGCAGAAATATTTGATGATGCAGTGGCTGTTGTTACCCCTAAACCACCGTCAACTAACATACCTGACCCTAAATTCTGCCACCCTGTGCAAAATCTGATCTTCCAGCCGTTCTTGGACGATGGTGTCTATGATGGTCTTCTTCTTTGGTCTCATCCTGATATAGACAATGTTAGAGAATTTGAAGTTGTTGTCACGTCTACTGACGGACAAATATTCAAATACCAGCCAGGGAAAGCTTTAGAACTTTACTTGGATAACATGCCTAAGTCTGACTACAACATAACCGTAATTGGTTACAATATTTACGGAGCGCCTTCAGCTCCTGTATCTATACAAGCAGATATTGGTTCTACTAAACCTATCACTAACGTAGTGTTCGAAGCTGACAACTTTGAGATGAACATCATCCCTAAAGTTAGCGGCATACTCCCTAGCAACACTACGTTCTTGTTTTACAGAGCTAATAACGTCAACAACCCAAGCCCTACAGACGTCACACTCTTAGGTCAAGGCGTAACTTATGTTGATGTGGGATTAATACCTAATACGGCTTACAAGTATTATGTTCAGGTGACTAATAGCGCCACGTTCTCAGAGTTGTACGGACCTTACTCCGCTAAGACTACAGACAACCCAGATGACATCTACGACTTTATTAAAGATCAGATACCTGGGCAGTATACCTGGGTTGTTTATGCCTCTGATGCATTTGGGGCAGACATAAGCAAGACTTACAATCCGGCTATCCACCACTTTGAAGGGCGTGCATACAATAAAGGTACTGAAACCCCTAGTTTAAATCCTCTTGATTACACGTTCATCCGTATTGGCGAGTTCATTTCTCCCGAAGACCAAGACATTTTAGACAATCTCGCACAGGGTAAGCTTCCTGACGGCTCCGCTGATTTGGTTAAGCCTAGCGATGTTTTGTTTAAGCCAGGAGACAAAGTCACCGGTACTAACATAGCTGACGGCGCTATCAGCACACCTAAACTAACTGCCAATGCAGTGACTTCTGACAAGATAATAGCTAACGCAGTGACTACAGCAAAGATAGCCGCTGGTGCTGTTACTGCAACACAGATAGCCGCTAACGCCATCACCGCCAGTAAGATTCTTGCCGGAGCAATCACAGCAGAGAAAATAGCTGCAAATGCTATCACAGCAGACAAGATAGCGGTAACAGTAGTCTCACCTATCAATAACTTCAGTGAGTTTGGTGATACTAGAGGATGGCTCTTACCTCCTAGCGCAGTCTTATCAGAAGCAATAAGTCTTAACGGAAAGAAAGCCAGAACCCTTAAGTTTGTAAACAGTCCGACAGCGTACAGAGAGCTTAAGTCTGATAAGTTCACAGTAGACCACAACGCTATATACGAAGTTCGGTTCTCTTACTACAGCGGTCAGACATCTCAGGGAGTTAAAACCGCCCTCAGACTGAAAGCATATAACTCTGCTAACTCTGAGGTAGTCTCAGACAGATACCACTTTGACACGCTAGCAAAAGCAGACACTACCCCGAGCCCAGACTTCTGGGCTGGCTCAGTTGTAAACGGTTGGCGCCATTTAGTCTCATATATAGTGGGAGCTTCTGCAGACGTAAACTCAGTACCTAAAGCCATTAACTCAACTTACGTCATAAAGCTAGGGGCTGACGCTAGGACACTAGCACTCCAAAGCATTACTTGGCCTAACGCTAACATAGTTGATACCCACATCTACTCTCCTTCAATCGTTAAAGTAGGCAGCGGCATTATAGTCGCTAATGAGATAAGAGCTAACTCTCTGATCACCTCCCCTGTAATTAAAGGCGGTACGGTTGAAGGCGTTGAGGTTATAGGCTCTACAGTAAAAGGTGGTAAAGGTTTGTTTGGTCCAGAAAGTGGCGCGCCGTATGAAGGTCACCATACCAGAATAGGCACTGACGGAACTATCGACACCGACAGACTTAGACTTAATCACGGAAAGACTGGCAGCAGGCTAGAGATAACTGCGGACGCTGTTCGAGTTTACGAAGGTAGTCTACTTCGTGTAGTACTTGGAAAATTATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
56b2e35c5252d2c6b8ace7ef06c2cbcd8328d0794846ff3b8dab8a250b5f7074
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7040
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50