Protein

View in Explore
Genbank accession
YP_009624514.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIYRKGEASLAADGTVTGYGTTWKDQLALIRIGATVVFLSGNEIGAIGTISAIVSDTQIQTIQTDGATVSRGKYFILLHDSLTVDGLAQNVAETLRYYQSSETEIAEAMDYFKTFDWEKFEAIAKGVKTNAEAAKVSETNAKASETNAKQSESAASSSKNAAAASQAAAKTSETNAKTSETNAKASENAANGSKVAAAGSATAADNSAKAAASSQAAAKTSETNSKSSETNAKSSENAALQSKNAAAGSATAAKTSETNAKSSETKAKTSETNSKTSETNAKNSEINAENWAKSVNPANLAQLDAENTFQKKQTFNNTIQLASSYAIPMVIQSANPTIRFNETDKPSGAPDYALVFDGGNFRIQKEDGGGENILSYDRISNTVTLSKGGFADKAGTRNNLDLGTGNTPEFGGLYLTGGSLEVRRYSDDSAPSGSLVARRARANGTTIVSSEMRANPNGSVEWIKRDAGGTPRSISLSENNEVVFNGLVLAPPNIEIGKANSAGTSYIDLHYDGTKNYDYSARISCDGMNREQSGYGNLRFNAGFMSFSAPGGHRFDYQTTFINDGAPIVSQARSNGQSSYLLFKDGASNYGYVGFPSAASKDITLYNYTTDKGIKVSDKFYADNMDAQIGGNIMCYGSSVYVRGGSGASNTHLWLANNAGRNRAVFFANDNFSWNIRADNGASGASGQALSFNGSTGEARATTFTNTSDERAKFWIKPVTSALDKICSLRGVTYSMHPTLQSTVRNAGVIAQDVRKVLPEAVKEGNHKDVLDKNCQVVENPLSLDYNALAALYVEAIKELKTEIDALKEEVKALKGE
Physico‐chemical
properties
protein length:818 AA
molecular weight: 86602,16340 Da
isoelectric point:5,95254
aromaticity:0,07579
hydropathy:-0,47518

Domains

Domains [InterPro]
DC_0974
ATT
1–200
DC_0974 DC_0849 DC_1985
DC_0649
ATT
184–247
DC_0649 G3DSA:6.20.80.10 IPR030392 Coil
IPR030392
CHP
709–812
IPR030392
YP_009624514.1
1 818
Architecture
ATT
RBD
STR
RBD
ATT 1-402 | RBD 438-568 | STR 569-623 | RBD 624-818
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009624514.1
1 818
Domain Start End Length (AA) Confidence
N-terminal 1 362 362 0,7199
Central domain 363 561 200 0,3327
C-terminal 562 818 256 0,8809
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-362
Central
363-561
C-terminal
562-818

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage Ec_L1
[NCBI] 		2070180 Uroviricota > Caudoviricetes > Drexlerviridae > Eclunavirus EcL1 >
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009624514.1 [NCBI]
Genbank nucleotide accession
NC_042122.1 [NCBI]
CDS location
range 45505 -> 47961
strand +
CDS
ATGGCAATTTACAGAAAAGGTGAAGCGTCGCTGGCTGCTGATGGAACCGTGACAGGATACGGGACAACCTGGAAAGATCAGCTTGCTCTGATTCGAATTGGGGCGACTGTCGTTTTCCTGAGCGGTAACGAAATTGGAGCTATAGGCACCATCTCAGCGATCGTTTCCGACACTCAGATCCAGACAATCCAGACGGATGGGGCTACCGTTTCACGCGGTAAGTATTTCATCCTCCTGCATGACTCACTAACGGTTGACGGCCTGGCACAAAACGTCGCTGAGACACTCCGTTACTACCAGTCAAGCGAAACAGAAATCGCTGAGGCTATGGATTATTTTAAAACGTTCGATTGGGAGAAATTTGAGGCCATCGCTAAGGGCGTTAAAACGAACGCTGAGGCGGCGAAAGTTTCAGAGACCAATGCCAAGGCTAGCGAGACGAACGCCAAGCAGAGCGAGAGCGCGGCATCCTCAAGCAAGAATGCGGCGGCTGCTTCTCAGGCGGCAGCTAAAACCTCTGAGACAAACGCTAAAACCTCTGAGACGAACGCCAAGGCAAGCGAGAATGCGGCTAACGGCAGCAAGGTAGCGGCGGCTGGATCAGCTACGGCAGCGGACAACTCAGCTAAAGCGGCGGCATCTTCACAGGCAGCGGCTAAGACCAGTGAGACTAACTCAAAGTCGTCTGAGACAAACGCAAAGTCTAGCGAAAACGCAGCACTGCAAAGCAAGAACGCGGCGGCTGGTTCGGCAACTGCGGCTAAGACCTCAGAGACTAACGCCAAGTCCTCAGAGACAAAGGCCAAGACTTCAGAGACTAACTCAAAAACCTCTGAGACCAATGCCAAGAACTCTGAGATTAACGCTGAAAACTGGGCTAAGAGCGTGAATCCCGCTAACCTGGCTCAACTGGACGCCGAAAACACGTTCCAGAAAAAGCAGACATTCAATAACACGATCCAGCTTGCTTCAAGCTATGCGATCCCGATGGTTATTCAGAGCGCTAACCCGACAATTAGATTCAATGAAACCGATAAGCCGTCTGGAGCACCTGATTACGCTCTCGTTTTCGACGGTGGAAACTTCAGGATTCAGAAGGAAGATGGTGGAGGTGAAAACATCCTTTCTTATGATCGCATAAGTAACACCGTTACGCTTTCGAAGGGTGGATTTGCTGACAAGGCTGGTACTCGTAATAACCTGGATCTTGGGACTGGTAACACGCCAGAATTTGGTGGGCTTTACTTGACTGGAGGAAGTCTTGAAGTTAGACGCTATAGCGACGACTCCGCTCCTTCCGGTTCTCTTGTTGCTCGCCGAGCAAGAGCCAATGGAACAACGATTGTTTCCAGTGAAATGCGAGCCAACCCAAACGGATCTGTTGAATGGATTAAACGAGATGCTGGCGGAACACCTAGAAGCATCTCGCTTTCTGAAAATAATGAGGTCGTCTTTAACGGGCTTGTGCTTGCTCCGCCAAACATTGAAATTGGCAAGGCGAACAGTGCTGGGACGTCTTACATCGACCTGCACTATGACGGAACGAAGAACTATGACTATTCTGCGAGAATCTCATGCGATGGTATGAACCGCGAGCAATCCGGTTATGGAAACTTGAGGTTCAACGCCGGATTTATGTCGTTCTCTGCTCCTGGCGGTCATCGATTTGACTATCAGACGACTTTTATTAACGATGGAGCACCGATTGTGTCGCAGGCAAGGTCAAATGGTCAGTCATCATACTTGCTATTTAAAGATGGAGCTTCGAATTACGGATATGTCGGTTTTCCTTCTGCTGCATCCAAAGATATTACGCTTTATAACTACACAACCGATAAGGGAATTAAGGTTTCTGATAAATTCTACGCTGATAACATGGACGCACAAATCGGCGGTAACATTATGTGCTACGGTTCGAGCGTATATGTTCGTGGCGGATCAGGTGCAAGCAATACTCACTTATGGCTTGCCAACAATGCAGGAAGAAACAGGGCGGTGTTTTTCGCGAACGACAATTTCTCCTGGAACATTCGAGCAGATAACGGCGCTTCGGGAGCGAGTGGTCAGGCCTTGTCATTCAACGGATCTACTGGTGAGGCAAGGGCGACGACATTCACAAACACATCTGACGAGCGCGCTAAATTCTGGATCAAGCCAGTAACAAGCGCCCTTGATAAGATTTGCTCACTGCGCGGGGTAACTTACTCAATGCACCCAACGCTGCAAAGTACGGTTAGAAATGCTGGAGTAATCGCTCAGGACGTTCGCAAGGTTCTTCCGGAGGCGGTGAAGGAGGGGAATCATAAGGATGTGCTTGATAAAAACTGTCAAGTTGTTGAGAATCCTTTATCTCTTGACTACAACGCACTTGCGGCTTTATATGTTGAGGCGATCAAGGAGTTGAAAACCGAAATTGACGCACTTAAGGAAGAGGTTAAAGCACTGAAAGGAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
827dd9b7d0fa387ff67bce825b93cfcb59ba6913fbbe962fa16106b472b5db24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6884
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of a novel phage Ec_L1 lytic to Enterobacter cloacae Li,Z., Ren,H. and Xu,Y. 2020-06-08 — GenBank