Protein

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Genbank accession
XUU32468.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MLRPKLNRVWTSNNANLRRDPGDAKYLQGWIAEIPTFQVLNYLQYKVDTTLLALAERGVFEWGTDVQYGLGSLVWDDATRTVYVATVGSPSRTLRPSENLGQWAASAIQVSRYDYDDIVSKISAHIADTTSNPHRLTANMIGAYNKAQIDSLISQYNALVASHANDRNNPHKVTAAQAGAVPVAGGTYTGPVTFQQGMLFDVSGTSKLSFGPAGLYMQSGDERIGLDASGVPVVGKASTNTNSRIITDAIFAEVKAREEPKYAVPAPNFCQHLIGDFNINSGKGAINASDSLYFNNDYGGALYRTAGQDVRETLYEGAGYGFTDCTICVDVLSNSPRAPSSDDSVGVFFSLNGLNSENIDFYLQNKGQLNLNRNASGASDWIYYNLPNRVNRWYRIAATLSTTTGLEIYVDGVRVASDASQNGAAACVGRYPQIHFQPTSRNYAVRNFRVWDFKMTPNQISTL
Physico‐chemical
properties
protein length:463 AA
molecular weight: 50581,70070 Da
isoelectric point:6,32234
aromaticity:0,10367
hydropathy:-0,30000

Domains

Domains [InterPro]
DC_0782
STR
5–430
DC_0782
G3DSA:2.60.120.200
STR
313–463
G3DSA:2.60.120.200
IPR013320
STR
321–463
IPR013320
PF13385
LEC
340–461
PF13385
XUU32468.1
1 463
Architecture
STR
STR 5-463
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shi_2KOFFS
[NCBI] 		3423637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32468.1 [NCBI]
Genbank nucleotide accession
PV615261.1 [NCBI]
CDS location
range 33593 -> 34984
strand +
CDS
ATGTTAAGACCAAAACTTAATAGAGTCTGGACTTCAAACAATGCCAACCTACGGCGTGACCCTGGGGATGCCAAATATCTCCAAGGGTGGATTGCAGAAATCCCAACCTTCCAGGTTCTTAACTATTTGCAGTATAAGGTTGACACTACTCTCCTAGCACTGGCTGAGCGTGGTGTCTTCGAATGGGGAACCGATGTTCAGTATGGACTTGGTTCCCTCGTGTGGGATGATGCAACTCGAACTGTTTATGTTGCAACTGTTGGTTCTCCTAGCCGTACTTTACGTCCTAGTGAGAACTTGGGGCAGTGGGCTGCAAGTGCTATTCAAGTATCTCGTTACGACTACGATGATATTGTTAGCAAGATTTCTGCACACATCGCAGATACCACTTCCAACCCACATCGACTGACAGCCAATATGATTGGTGCATACAACAAAGCACAAATCGATTCGCTGATTTCTCAGTACAATGCCCTTGTTGCGAGTCATGCCAATGACCGGAACAATCCTCATAAAGTAACTGCTGCCCAGGCAGGTGCTGTTCCTGTCGCTGGAGGTACTTACACCGGACCTGTTACATTCCAGCAAGGTATGCTGTTCGATGTAAGCGGTACTTCTAAGTTATCGTTTGGTCCTGCTGGCCTTTATATGCAGTCAGGTGACGAACGTATTGGGCTGGATGCCAGTGGTGTTCCGGTTGTTGGTAAGGCATCAACAAACACCAACTCTCGAATTATTACTGATGCAATATTTGCAGAAGTTAAGGCGCGAGAAGAGCCAAAGTATGCAGTACCTGCACCAAATTTCTGTCAGCACTTGATTGGCGATTTTAATATCAACTCTGGCAAGGGTGCAATCAATGCCTCCGACAGTCTATATTTTAACAACGATTATGGTGGCGCTCTGTACAGAACTGCTGGGCAGGATGTTCGAGAAACTCTTTACGAAGGTGCGGGATACGGATTTACAGACTGCACAATCTGTGTGGATGTTCTTTCCAACTCACCTCGTGCGCCGAGCAGTGACGATTCTGTTGGCGTATTCTTCTCCCTAAATGGATTGAATAGTGAGAACATAGACTTCTATTTGCAGAACAAGGGGCAGCTCAACCTTAACCGAAATGCCTCTGGTGCTAGTGACTGGATTTACTATAATCTCCCTAACCGAGTGAATCGCTGGTATCGTATTGCTGCAACCCTAAGCACGACCACTGGACTTGAAATATACGTTGATGGTGTTCGTGTGGCTTCTGATGCCTCGCAGAATGGTGCGGCTGCATGTGTTGGCAGGTATCCTCAGATTCATTTCCAGCCAACATCAAGAAACTATGCTGTTCGCAACTTCCGAGTTTGGGATTTCAAAATGACACCAAACCAAATCTCTACTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f49303c60997d59ab55c6ecdbcac324bfb3f4cc299d66d3a0659cf4ebe5c9cd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50