Protein

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Genbank accession
XCO41312.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLDKLNQPKGSTIGVLRDGRTIQEAIDDLYVFKDSQGFINVDMQAGTPLEVNLAKFSLFTSGGRATIDASEFTGPTALWIHATGSYPTPMYRNTTNYMESIELVGGLKAGVDGWTWGNRGMTTGTEYNGQCIIRGCSVYKFDNCIKCTDSSWRYKVSDCMISTGITSVFNAPAGLIDSGESITFSDTQFSDSNGAKFIIACANFSVGMSGTSVLNTPVVISGNGASLLIDGMGNNENPGKSSWMRYVEVTGIGARFILQSSTLVCNGPSSQTRPLVLVGAKARAIFIAVKFPGNLYMFHVNNPEKVRTFCEGEGIVKTIACTYDIESGAGNIPVHRSLNRFYNNGFEQDLAGWALNVGGDPAQTATIVTDDTNSGGKAVKVASLDGKSVFLTQNVRVSSGEEFASFVAYKVNKAASGSTPGNLTVTFKSENGTTIGTGSTSNFSNTVGAWQQGGLFCRGVAPVGAVSAEISLRVRDGAEVILDDVIVNFL
Physico‐chemical
properties
protein length:490 AA
molecular weight: 52016,96960 Da
isoelectric point:5,44196
aromaticity:0,08980
hydropathy:-0,02939

Domains

Domains [InterPro]
DC_0903
STR
10–484
DC_0903
G3DSA:2.60.120.260
STR
338–488
G3DSA:2.60.120.260
IPR008979
STR
340–489
IPR008979
XCO41312.1
1 490
Architecture
STR
STR 10-489 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41312.1
1 490
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9034
Central domain 18 335 319 0,9886
C-terminal 336 490 154 0,9930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-335
C-terminal
336-490

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146052
[NCBI] 		3232231 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41312.1 [NCBI]
Genbank nucleotide accession
PP889501 [NCBI]
CDS location
range 38045 -> 39517
strand +
CDS
ATGTTAGACAAACTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTATCCAAGAAGCTATTGACGACCTGTATGTGTTCAAGGACTCGCAAGGCTTCATAAACGTGGACATGCAGGCTGGTACCCCTCTTGAGGTTAACCTAGCGAAGTTCTCACTGTTCACTTCAGGAGGACGCGCCACGATTGACGCCTCGGAGTTCACTGGGCCTACTGCACTCTGGATTCACGCCACTGGCTCCTATCCGACCCCAATGTACCGCAACACGACTAACTACATGGAGTCCATTGAGCTTGTGGGCGGCTTAAAGGCTGGAGTTGATGGATGGACTTGGGGTAACCGTGGGATGACCACTGGAACCGAGTATAACGGGCAGTGTATCATCCGTGGGTGCAGCGTCTACAAGTTCGATAACTGCATCAAGTGTACCGACTCGTCTTGGCGCTACAAGGTATCTGACTGCATGATTTCTACCGGAATCACCTCTGTGTTCAACGCCCCTGCTGGACTGATTGACTCCGGCGAGTCCATAACCTTCAGCGACACTCAGTTCTCCGACTCGAACGGGGCTAAGTTCATCATTGCGTGTGCAAACTTCAGTGTAGGCATGTCCGGCACAAGTGTACTCAATACCCCGGTTGTTATCTCTGGGAATGGTGCTTCACTGCTCATCGACGGCATGGGGAACAACGAGAACCCCGGTAAAAGTTCTTGGATGCGCTACGTCGAGGTGACTGGAATCGGAGCACGCTTCATCCTACAGTCCTCAACGCTCGTGTGTAACGGCCCATCTTCTCAGACCAGACCGCTTGTGCTTGTTGGGGCGAAAGCTCGCGCAATCTTCATTGCCGTCAAGTTCCCCGGTAACCTCTATATGTTCCATGTGAATAACCCAGAGAAGGTGCGAACATTCTGTGAAGGCGAGGGTATCGTTAAGACAATCGCGTGTACATACGACATTGAATCGGGGGCTGGTAACATTCCAGTCCACCGCTCACTTAACCGATTCTACAATAACGGGTTCGAGCAGGACTTGGCTGGATGGGCGCTTAACGTTGGTGGCGACCCAGCACAGACGGCTACAATTGTCACGGATGATACCAACAGCGGCGGTAAGGCGGTTAAGGTTGCCTCTCTGGATGGTAAGAGTGTGTTCCTTACCCAGAATGTCAGAGTGTCTTCTGGAGAGGAGTTTGCATCGTTCGTGGCCTACAAGGTCAATAAGGCGGCATCCGGCTCAACACCGGGTAACCTGACAGTAACCTTTAAGTCCGAGAATGGTACCACTATCGGTACAGGCTCGACGTCTAACTTCTCGAACACTGTCGGGGCGTGGCAGCAAGGTGGCCTGTTCTGCCGAGGCGTTGCCCCAGTAGGTGCTGTATCCGCTGAGATATCTCTCCGTGTTCGTGATGGTGCTGAGGTTATCCTTGATGACGTTATCGTAAACTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed49690a8e8c9f0295eb8274e5249ec3a856cd3ba8bfa0384774f2263c827ebd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7526
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank