Protein

View in Explore
Genbank accession
UOK17559.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MMVGDVLSSIFIRRKRSIADVIPDVAVEEIHSDDLIVTDHPVEQGASISDHAFKKPAEVALRYGWSNSSAVNNVMRGGLTVSVEDVYQKLLALQESREPFDLITGKRAYNNMLIVSLKVETNIITNDVLYISAICRQIITVPTYLTAAAPHEDQSNPEVTGNVEVFPIEQPQPLLAIPDGINAVEGLPGSKS
Physico‐chemical
properties
protein length:192 AA
molecular weight: 20950,61100 Da
isoelectric point:4,76518
aromaticity:0,05208
hydropathy:0,00885

Domains

Domains [InterPro]
DC_0601
STR
1–165
DC_0601
IPR048494
ATT
24–145
IPR048494
UOK17559.1
1 192
Architecture
STR
ATT
STR
STR 1-23 | ATT 24-145 | STR 146-165 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BaM-IFTN9
[NCBI] 		2928725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bordetella avium
[NCBI] 		521 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOK17559.1 [NCBI]
Genbank nucleotide accession
OM293958.1 [NCBI]
CDS location
range 13976 -> 14554
strand +
CDS
ATGATGGTTGGTGACGTTCTAAGCTCAATCTTTATCCGGCGCAAGCGATCTATTGCAGATGTAATCCCGGATGTGGCAGTGGAAGAGATTCACAGTGACGACTTAATCGTCACGGACCATCCTGTGGAGCAAGGGGCTTCGATTTCGGATCATGCATTCAAGAAACCGGCTGAAGTGGCACTGCGGTATGGGTGGTCCAACAGCTCAGCAGTCAATAACGTAATGCGGGGCGGCCTTACAGTTTCGGTTGAAGATGTCTACCAAAAGTTACTGGCTTTACAGGAGTCGAGGGAGCCTTTCGATCTGATCACTGGTAAGCGTGCTTACAACAACATGCTTATCGTCAGTTTGAAAGTTGAGACGAACATTATCACTAACGATGTTCTGTATATCTCGGCTATCTGCCGTCAGATCATCACTGTGCCGACATATTTGACGGCAGCGGCACCTCACGAGGATCAATCTAATCCTGAAGTAACAGGAAATGTGGAGGTATTTCCTATTGAGCAGCCGCAGCCGCTTCTGGCCATTCCTGATGGAATTAATGCTGTCGAAGGGCTGCCGGGTAGCAAGTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1793da1a558210d51fe35d9572db7cf8596cd89a22217375ccef8bf904fa8555
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Bordetella avium bacteriophages Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A. 2023-06-15 — GenBank