Protein

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Genbank accession
XCD07524.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MCLLTNSSFTINRGQTLNRVCPLFYEMEENYMEITANAIQLVEQGQNIQFTETAVRSCKPCVIHREGSGITTLRGITNQCNARFLVTFSGNIAIPTGGTIEEISLAIAIDGEPLQSTRMRVTPAAVNNYFNVSAQAFVNVPRGCCVTVAVENTSAQAINVQNANLIVTREA
Physico‐chemical
properties
protein length:171 AA
molecular weight: 18606,01360 Da
isoelectric point:5,41070
aromaticity:0,05848
hydropathy:0,07778

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCD07524.1
1 171
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,6617
Central domain 12 160 150 0,0068
C-terminal 161 171 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-160
C-terminal
161-171

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 39
[NCBI] 		3145757 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD07524.1 [NCBI]
Genbank nucleotide accession
PP511791.1 [NCBI]
CDS location
range 46640 -> 47155
strand +
CDS
ATATGTCTGCTGACAAATAGCAGTTTTACGATAAACCGAGGGCAGACTTTAAATAGGGTTTGCCCTTTATTTTATGAAATGGAGGAAAATTATATGGAAATAACAGCTAATGCTATTCAGCTTGTCGAACAGGGGCAGAATATACAGTTTACAGAAACAGCGGTTAGAAGCTGTAAACCTTGTGTCATTCACAGGGAAGGAAGCGGAATAACGACACTTCGGGGAATTACGAATCAATGTAATGCAAGGTTTTTAGTTACATTCAGTGGAAATATTGCTATTCCAACAGGTGGAACGATTGAGGAAATTTCTCTTGCCATTGCGATTGATGGAGAACCGTTGCAGAGCACAAGGATGAGAGTAACACCTGCCGCTGTAAACAATTATTTTAATGTTTCCGCACAGGCTTTTGTAAATGTTCCGAGAGGATGTTGTGTGACGGTTGCGGTTGAAAACACTTCTGCACAGGCTATCAATGTACAGAATGCTAACCTGATTGTCACAAGAGAAGCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ed12b971a21ca2fde492cd374d1764aab7e9f5f489dde3cda11313de71855d36
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7179
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank