Protein

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Genbank accession
QFG07534.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVCQMPWDIINIKSNDPGRVILTAVEINGTHRGFLNGTQSQVGQFLTFFEDQPRAGAELAITSAFAIGDSLAHGTYIYNGSLGHEESIARQGTGGTLLQSSGFQIFRPGGVSAGEAISRAWGLMGFPTGVSTVPIDGGNADYWEPNWQAPIGSAGRGHDWFYVCSSNIRGFAGKKGVLPDNVNVLYQSPAYPEKIYVCRGSTSNMAAQSARKVYVQDWYNVTPTKVIWYVLNLRYSNGSMGVSGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYVGNNAAYTGVFGDNTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDITPSYPGAGDFYTPLATVWLGLPNAHSTVILTTEVIMGNLNTAGMPVRTYGGSAWQVQGRRQQSYTAGDGVFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEFAFRRNGYIYTIKNLGNGNVELGVIIHAAEAAAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 63974,67820 Da
isoelectric point:6,59693
aromaticity:0,12479
hydropathy:-0,16509

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
QFG07534.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFG07534.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,4966
Central domain 11 243 234 0,7792
C-terminal 244 593 349 0,6999
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-243
C-terminal
244-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_SB10
[NCBI] 		2591134 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus SB10
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFG07534.1 [NCBI]
Genbank nucleotide accession
MK947458 [NCBI]
CDS location
range 109556 -> 111337
strand +
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGCGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCCTTCGTCCTAGTTGATGGGACTTACGAGGCTGCCCTAGGTAATGCTGGTAATGGGTATTTTGTATGTCAAATGCCTTGGGATATTATAAATATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTGTTGAGATAAATGGTACTCATAGAGGTTTCCTTAATGGTACACAATCTCAGGTTGGCCAGTTTTTAACATTCTTTGAAGACCAACCACGTGCTGGTGCTGAATTGGCAATAACATCTGCCTTTGCAATCGGTGATAGTTTGGCTCATGGTACCTATATTTATAATGGTAGCTTAGGTCATGAGGAATCTATTGCTAGACAAGGAACTGGCGGTACTTTGCTACAATCTTCCGGTTTCCAGATCTTTAGACCTGGTGGTGTTTCTGCTGGTGAAGCTATTTCCAGAGCCTGGGGATTAATGGGCTTTCCAACGGGTGTATCTACAGTTCCTATAGATGGTGGTAATGCAGACTATTGGGAGCCTAACTGGCAAGCGCCTATCGGGTCTGCTGGTAGAGGTCATGATTGGTTTTACGTTTGTAGTTCCAATATTCGTGGCTTTGCAGGTAAGAAAGGTGTACTACCAGATAACGTAAACGTTCTTTACCAATCTCCTGCATACCCAGAAAAAATATATGTTTGTAGAGGTTCTACTTCTAATATGGCTGCTCAGTCTGCTAGAAAGGTATATGTACAGGACTGGTATAACGTTACACCAACTAAGGTTATTTGGTATGTGCTAAATCTGCGCTATTCTAATGGTAGTATGGGAGTTTCTGGTAATCCATTTACCGGTTCAGATATCCTAATATCTCCATCTAACTTTACTATTAAAGGTGTTAGCCTACCAAATACAGGCTATAAATTTATTAACCAGAATGCTTTCGGAAACTTAGGCTATCGCCCTGATATGGAGTATGTTGGTAATAACGCTGCGTATACCGGAGTTTTTGGTGATAATACTGCACGATGTGAATTTATCGGCTCTAGTAATGGCGGGTTGTGGTCTCCTGTTAACTATGGGGGTGCAGCTTCTCAAATTAGCTTATATAAATTTGGTGTAGGTAAACAATGGTATGTAGATACTAATACCAACTCCATTGGTAATGAACATGGACCTGTGTGGAGTCCTAGTACTGTACCCCTCAGGTTATTCCCAGGCAACGTTGCAAGTACTTATGTAGGGGACGATATAACTCCATCCTACCCTGGTGCTGGTGACTTCTACACACCTTTGGCCACAGTTTGGTTGGGATTACCAAATGCTCACTCTACTGTTATATTAACTACTGAAGTTATTATGGGTAATCTTAATACTGCTGGAATGCCTGTGCGTACTTACGGAGGTAGCGCTTGGCAGGTACAAGGTAGACGTCAACAAAGTTATACAGCTGGTGATGGTGTATTCCACCAGATTCTTACTCTGCCACCTGGATATCTAGTACCTTATCACAGTACAACTTCCTATAGTTATACACAAACTTGGGCTAGTAGGCCTGATGAGTTTGCTTTCCGTAGGAACGGATATATTTATACTATTAAAAACCTTGGTAATGGCAACGTTGAGTTGGGTGTTATCATTCACGCTGCAGAAGCGGCAGCTGTTTTCTTGCCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dd85d0cd33d024ae3c0b0bfb233dafb5930bd45f81047ee11e815328d9f3902
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence analysis of broad host range Salmonella enterica bacteriophages Bhandare,S.G., Colavecchio,A., Emond-Rheault,J.-G., Hamel,J., Kukavica-Ibrulj,I., Boyle,B., Levesque,R.C. and Goodridge,L. 2024-03-29 — GenBank