Protein

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Genbank accession
QBX26657.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVCNLNTTNLAQVDGGYLIKQGDVASTFGFVLLDEDYRAVPSLEGEVAVVSLTMGKYQWKKSVTVTNSGVIFNLDTILPIGKYRLEISAGGYIFPSDKETHIKIVASDKELVTEEVHALKELDIAKEVEKQLSEKTVTDGGVCPEFPDLLFFYNLGKV
Physico‐chemical
properties
protein length:158 AA
molecular weight: 17379,69740 Da
isoelectric point:4,74471
aromaticity:0,08861
hydropathy:0,03228

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan336
[NCBI] 		2548112 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis
[NCBI] 		28037 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26657.1 [NCBI]
Genbank nucleotide accession
MK448910.1 [NCBI]
CDS location
range 39009 -> 39485
strand +
CDS
ATGGTCTGTAATCTCAATACGACCAATCTCGCACAAGTGGATGGCGGTTACCTCATAAAACAAGGTGATGTGGCTTCTACCTTTGGATTTGTCCTCCTAGACGAAGATTATCGAGCCGTCCCCTCTCTAGAAGGGGAGGTGGCGGTCGTTAGTCTGACAATGGGCAAGTACCAATGGAAGAAGAGCGTAACTGTCACAAACTCAGGCGTGATTTTTAACCTGGACACTATCTTACCAATCGGGAAATACCGCTTAGAGATTAGCGCTGGTGGGTATATTTTCCCAAGTGACAAAGAAACCCACATCAAGATAGTGGCTTCAGATAAAGAATTGGTCACAGAGGAAGTCCATGCTCTTAAGGAGCTGGATATCGCAAAGGAAGTTGAGAAACAACTTTCAGAAAAAACAGTAACAGATGGTGGAGTATGTCCGGAATTCCCAGATCTACTCTTTTTTTACAACTTGGGGAAGGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
56d1183e2906f0eef2d42ef9ad9ae2d12b1952e6f8f9f17d9997fb3d61a10bd8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7484
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank