Protein

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Genbank accession
AAX91116.1 [GenBank]
Protein name
ORF004
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGDKVFIEVTAYHIMYEFQNHSVESNKLDDDSSETGKTPEYSLDEYLRYGFANQKTSVKMTYKIIGDFKRKIPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEICFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIKTTDINYSNDFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDKSSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
Physico‐chemical
properties
protein length:527 AA
molecular weight: 61022,11660 Da
isoelectric point:5,58070
aromaticity:0,11765
hydropathy:-0,55920

Domains

Domains [InterPro]
G3DSA:6.20.110.10
ATT
4–90
G3DSA:6.20.110.10 G3DSA:3.55.50.40 DC_1309 DC_0297
IPR044051
ENZ
18–92
IPR044051 IPR010572
AAX91116.1
1 527
Architecture
ATT
STR
ENZ
RBD
ATT 4-90 | STR 91-377 | ENZ 378-486 | RBD 495-527
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAX91116.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,7729
Central domain 231 435 206 0,4821
C-terminal 436 527 91 0,0039
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-435
C-terminal
436-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 42E
[NCBI] 		2908113 Uroviricota > Caudoviricetes > Triavirus >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX91116.1 [NCBI]
Genbank nucleotide accession
AY954955 [NCBI]
CDS location
range 15571 -> 17154
strand +
CDS
ATGGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGATGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTTTACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTTCATAATTTATCATGGTGAAAAATACACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGATAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGTGGAATCAAATAAGCTTGATGACGACAGTAGCGAAACTGGTAAAACGCCAGAATACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACGTCAGTCAAGATGACCTATAAAATAATTGGAGATTTTAAAAGAAAAATACCAATTGATGAATTAGGTAATAAAAATGGCTTAGAATATTGTAAAGAAGCAGTAGATTTGTTTGGTTGTATTATTTATCCAAATGATACGGAGATATGTTTTTATTCTCCTGAAACATTCTATCAAAGAAGCGAAAAAGTAATAAGGTATCAATATAATACTGATACTGTGTCTGCTACTGTCAGTACGTTGGAATTAAGAACAGCTATAAAAGTTTTTGGGAAAAAGTACACAGCCGAGGAAAAGAAAAATTATAATCCTATTAAAACAACTGACATTAATTACTCAAATGATTTCATAAAAGAAGGTACTTATCGCACAGAAACAATTGGTTCTAAAGCAACTATTAACTTTGATTGCAAGTATGGTAATGAAACAGTTAGATTTACAATCAAAAAAGGTTCCCAAGGTGGAATATATAAGTTGATTTTAGACGGCAAGCAAATTAAGCAAATTTCTTGTTTTGCTAAGTCGGTTCAGTCTGAAACAATAGATTTAATAAAAAATATTGATAAAGGTAAGCATGTTTTAGAAATGATATTTTTAGGAGAAGACCCCAAAAATAGAATTGATAAGTCTTCAAATAAAAAAGCTAAGCCTTGTATGTACGTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGACAACTCAGGTCGCAATCAATACAAAGCAATTGTTGACTACGTCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGAATTTGCAAAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAATAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAATTAAAGGTTGTTAAACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTTTCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGTTATTGCACAAGATAATAGATATAACTATCAAGCAAATCGTATAAATCATTTATACACTAGTACTTTGAATTCTCCTTTCGAGACAATGGATATAGGGAGTGTATTAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfadb9c70d620403f1f7596512efc00e001ce2816194529f7837d389742fa13d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50