Protein

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Genbank accession
BCG50227.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MTAPSEKQFARVRIIRGTSISQDHQFGMRWPRCLAPSNYKDENYADDPDMPFEGVWNGRYWDLRAHGFGKFGERDSYGNGSIYVGPYEGVEIISNDVPEYRPAIVTHKLKHVGDLPWIPTEVLRLANEVKHQNYKVNTPTKFQKRELIADVGKPLMYQLGLLIKYRPDELDYVYFSCANGAEEHVDQLDPAKFRDTTFVIPVILPNGDNFITAEDEKMKVEIGGVYQFNHEKPHSMTVADNTGAVVIMVGVKK
Physico‐chemical
properties
protein length:253 AA
molecular weight: 28854,37830 Da
isoelectric point:5,91935
aromaticity:0,11067
hydropathy:-0,51225

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BCG50227.1
1 253
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,0011
Central domain 21 219 200 0,4022
C-terminal 220 253 33 0,9859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-253

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP13
[NCBI] 		2743402 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCG50227.1 [NCBI]
Genbank nucleotide accession
LC554890 [NCBI]
CDS location
range 140461 -> 141222
strand +
CDS
ATGACTGCTCCATCTGAGAAGCAATTCGCTCGAGTGCGGATTATTCGTGGTACATCCATTTCTCAAGATCATCAATTTGGCATGAGATGGCCTCGATGCCTTGCTCCATCCAATTATAAGGATGAGAATTACGCTGATGATCCTGATATGCCATTTGAAGGTGTATGGAATGGTAGGTACTGGGACCTACGTGCTCATGGATTTGGTAAATTCGGTGAACGTGATTCCTATGGCAATGGTAGTATCTATGTTGGTCCGTATGAAGGTGTAGAAATCATCAGTAATGATGTGCCTGAATACCGACCAGCAATTGTTACTCATAAATTGAAGCATGTTGGTGATCTCCCATGGATTCCAACAGAAGTATTGCGTCTTGCTAATGAAGTGAAGCATCAGAACTATAAGGTCAATACACCGACCAAATTCCAGAAGCGTGAACTCATTGCTGATGTTGGTAAGCCTCTGATGTATCAACTGGGGCTTCTGATTAAGTATCGTCCTGATGAATTAGATTATGTCTACTTCTCATGCGCAAATGGTGCTGAAGAGCATGTTGATCAACTTGATCCAGCTAAGTTCCGTGATACTACTTTCGTAATTCCTGTTATTCTGCCAAATGGTGATAATTTTATTACTGCAGAAGATGAGAAGATGAAGGTAGAAATTGGTGGAGTATACCAATTTAATCACGAGAAGCCTCACTCAATGACAGTTGCTGATAATACTGGTGCTGTTGTGATTATGGTTGGAGTGAAGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca61908efc08672e08ff636f0d096366d288d4ac91926ff760785a3b34222350
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RP13 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank