Phage RBP Database

Genbank accession

XTB82818.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MASDNFDMEWGDDPFGGDIDFDMDFDMDPFKGKGFVRSFTTGFLSGLVDETVGTGDARMRTLRTTLPGTWSNALDKVSFISDRLDKLAQEFKEENSESVKSLQTIAAHLNSKMGDKLPGFMSNSLGNFSSKDFSDWEKLDTDANPRFKDKMGRVDESDVEQIMGTAESSQSSMFASLGESLNSMTAAASGAVIAQIGAGNRQLVNIEGGIRDLLSYQRNVQAKLDQAQLNLTARSYVQDAKFYKFMEAGVHQEIKELKSILHFTKMSDFQKTTTYTATKEYLRTRAFGAVGKRIGGLTEGLRERFGEGNRKEAYGAFGDLFGGLADGLEMGGDVSFSRGLIGNILGKMVAGVAVDEMPYFFTRGPGKRMIDSLMKKYPDQGKYIKQKVDELADVGNVVSHISMSGGGIANYMADNWQMVNEEPFYDYEEYLDSLPPGKKPIPKAIWVAKNAAENRGRQSLNRLMGENSRSRGTQYTISRRNPKDLDKPGIWKEMNNITLNEVLPGLISQTNQILNQMRTGKDDVEKVGYNYTRGEFQSDSDRRISVATDLMPHAEFRSFTKAAMNMVESIDPGGLMGQPARKALAKQIIIDIDKGYGFQPLYYMGDIPNVSKGDLDEIHAAMKRHFGITDDDVQTYNKGDGFTRAKMLGKLNTVEGRERLNEASSKAQDLKENIPNIQERINLLRTTGNEQMLRDIGVIYTDGGVDKINIQAYHDRIGQYMDNPDNPILKGVTKQGKSSASPTKGGMPSPVIGDRAPAQDPYAELNSTLTTLSERLTNLDHPAQNKTSTDMNWDAATGIFTDIKTSNEGILAKATDMTTLLTEFIELAKKGQLVSGAPATPSQAREEEQAKKSVMEKFRGLVPADMMGKGMEFLMKNNPLILGGLLGGVASGFATNPIMAASIAGLGLMGGAYMQWRARGNKGGSEASQGAEPSDDEDILDETGEPILKASKLNMGDYIDMASKRVIKTWGDIRGPIMDTATKAVIGVRDLAGKIFGPDGRAVALKGLTAVRDAALSAYNLADPLGRMRSVLDAGKELVYQQDVYLKTDLKNPVLRASKFKTGDYFVRDESGNFTPIKGWNEINGAVYDEQGNQLVSEDEYHSGLVTSTGAAVRNVGTGAANFVGGAAGLAKSGVNALLSKFGYNREEPGQAGNVNKNASSGISFGKGGVERRLDRIYNLLCQQFDIPPEGLDGENAFAGEKVKSGLRLNSLAWKEKQKEKDEKHKVNEAIIKISESMDGGKDEGPGEKKEGWFDKIKGLAMGAGSFAMNLLKNPLGAIGGLLFSAGKMVLGSGAASLGRLAKIGTALFSGVLGVASPIFGLLKMGFTKLAQAFMMGRGAKAGMDMLDGLDGPEQRGQSTKRGRKGRGKTAGTKGGKPANPKTGGRLGKVGKLGRGLVGSPWGMAASMGGAYLLGGFDEDAPDASLTQSSDVSMGERDPVTGHYRTGGDAAVDALTSYLPSGMLAKAAGDAVAGDKRSTLENYGMFWASDGKFFYRRDEVEEYEDKLQGIDRTPEGYGELKEVSETPQRAVRLAMYGVRDQKSGLGRRVGWLEQVLYPYVQIRNNRASFKDNVPLDKILTDFVRTAGGTAVDAESAKAWFVGRFKPIFLTFNATVSVANMGDLEEFDRASGYIVVQTLERVQQGIGTIQPYPYKVDTRIDARIPLMDEMKTSEVVNALMDKLRKEYPSPSEGVVDTLKAETPQQVAKKEISSQTLGMTAENMASDKMGAEAARASREDIERRFTQPEQVKTIDITDMIPSNGDAIDPFTMTRLAVYGNIDNMPWRCEAVLRLETYIQSYIMVIGEQARFTGKSGQMLEIFRPAFRIAKPHEEMNWLTWFRDRFLPTVMLYCVQVKKYRGTTPEKGWRALSATNKFDIARLLVDQMVTVDNQVKSIWEIEAGPFPNSKSGTFNDRADKYITILDSKASEARLKDPELEAEKSRGKQGDDQSQTANAQRMQQLTKVAMDKQLAGNTNTSNFATGVGVGAGVGSGSPAGAYPNATMSLPGGGAGSAGQFTGQADTNFNPEYLKKQGDDKGIKMSPEQGEKLMLNHLLKAGITDIKTIALALAMTKKETGNYQNTVEDTRWSAPTLLKYFKNIPDEATAQKVAAMSPPERAMWVYGRNPKAKGLGNTKPEDGWDYRGRGFFQLTGKANYERFKKETGIDVVSNPKLVSEDPNVMAESAVRFLKNSPAMMSIAKTGDFETAVRGINGGNAVPATDERRKYYQEYLNKLRNGDISMDSAAAEAAATPAATPEPPAAADQNVPPDATAVQPGGPSAPKGSSESDLTKLINESEKATAPSNAGTPPPQATASTLDPVNAVSNDGPTAPVNTSTPESKPAAPTGPVNATSASTPSMATTPAPAIPQKAPVAPQAPAAVPEKGKAEHIQSTDVDAVRELQRANQTLARIAQLLQGSQKTPTVSV

Physico‐chemical properties

protein length:	2424 AA
molecular weight:	262480,50940 Da
isoelectric point:	6,33700
aromaticity:	0,07096
hydropathy:	-0,48709

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0124	STR	DC_0124	1	2265	Novel HMM	DC_0124	Central	Low	Positional only	152 proteins / 152 hits
Coil	Unmapped	-	660	687	Coils	Coil	-	-	-	-
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	2044	2233	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	2056	2233	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
DC_2274	RBD	DC_2274	2234	2424	Novel HMM	DC_2274	C-terminal	Low	Positional only	3 proteins / 3 hits

	Name	Taxonomy ID	Lineage
Phage	Shewanella phage SXP01 [NCBI]	3420196	Viruses > unclassified bacterial viruses >
Host	Shewanella xiamenensis [NCBI]	332186	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Genbank protein accession

XTB82818.1 [NCBI]

Genbank nucleotide accession

PV593634.1 [NCBI]

CDS location

range 239498 -> 246772
strand -

CDS

ATGGCAAGTGATAATTTTGATATGGAATGGGGAGACGATCCCTTTGGTGGAGACATCGATTTCGATATGGATTTCGATATGGATCCATTCAAAGGTAAAGGCTTCGTCCGTAGTTTCACTACTGGATTCTTATCCGGGTTAGTGGACGAAACGGTAGGTACCGGTGACGCTCGTATGCGTACACTCCGTACTACACTCCCTGGGACATGGTCGAATGCGCTAGATAAAGTTTCCTTTATATCTGACCGGTTGGATAAACTGGCACAGGAGTTTAAGGAAGAAAATAGCGAATCGGTTAAATCCCTACAAACCATTGCCGCTCATCTTAATTCCAAGATGGGGGATAAACTCCCTGGATTTATGTCTAACTCTCTGGGTAACTTCAGTTCCAAAGACTTCTCCGATTGGGAGAAACTGGACACTGACGCTAACCCAAGATTCAAAGACAAGATGGGGCGTGTTGACGAAAGTGATGTTGAACAGATTATGGGAACTGCAGAAAGTTCTCAATCGAGCATGTTCGCTTCACTGGGTGAATCTTTAAACAGCATGACCGCTGCTGCTAGTGGTGCAGTCATTGCTCAGATCGGTGCAGGTAACCGACAGTTGGTAAATATAGAAGGAGGTATTCGTGACCTTCTGTCTTACCAACGTAACGTACAAGCTAAGCTGGATCAAGCTCAGTTAAACTTAACAGCTCGTTCTTATGTTCAAGATGCTAAGTTTTACAAGTTCATGGAAGCTGGTGTCCACCAGGAAATCAAAGAACTTAAATCCATCCTTCATTTTACTAAGATGTCTGACTTCCAAAAGACAACGACCTACACGGCTACCAAAGAGTATCTGCGTACTCGTGCCTTCGGTGCAGTTGGTAAACGTATTGGTGGTTTAACGGAAGGACTCAGAGAACGTTTTGGTGAAGGTAACCGTAAGGAAGCTTATGGTGCTTTCGGTGATCTGTTCGGTGGACTTGCAGATGGCTTAGAGATGGGCGGGGATGTATCATTCAGCCGTGGGTTGATTGGTAACATCTTGGGTAAAATGGTAGCGGGCGTTGCTGTTGACGAAATGCCTTACTTCTTTACCCGTGGTCCTGGTAAAAGAATGATCGACTCCTTGATGAAGAAGTATCCAGATCAAGGTAAGTACATCAAACAGAAAGTAGACGAACTGGCTGACGTTGGTAACGTGGTTTCTCACATCAGTATGTCTGGTGGCGGGATTGCTAACTACATGGCCGATAACTGGCAGATGGTTAACGAAGAACCGTTCTACGACTATGAGGAATATCTCGACTCACTTCCTCCTGGTAAGAAACCTATTCCTAAAGCCATCTGGGTTGCTAAGAACGCAGCTGAGAACCGTGGTCGTCAATCACTGAACCGTTTGATGGGTGAGAACTCTCGCTCTCGCGGTACGCAGTACACCATCTCTCGTCGTAACCCCAAAGATCTGGACAAGCCAGGTATTTGGAAAGAGATGAACAACATCACGTTGAACGAAGTGTTACCAGGGTTGATCTCTCAGACTAACCAAATCCTGAACCAAATGCGTACAGGTAAAGACGACGTTGAGAAAGTAGGATACAACTACACTCGTGGTGAATTCCAATCTGACTCCGATCGTCGTATCTCTGTAGCAACTGACTTGATGCCTCACGCTGAGTTCCGTAGCTTTACCAAAGCTGCTATGAACATGGTTGAATCTATCGACCCAGGAGGTCTGATGGGACAACCCGCTCGTAAAGCATTAGCAAAACAAATCATCATTGACATCGATAAAGGTTATGGTTTCCAACCCCTCTACTACATGGGTGATATTCCTAATGTAAGTAAAGGTGACCTTGACGAAATCCATGCAGCGATGAAACGTCACTTTGGTATTACCGATGACGATGTACAGACATACAACAAGGGTGATGGATTCACTCGTGCTAAAATGCTCGGTAAACTGAATACCGTTGAAGGGCGTGAACGTTTGAATGAAGCAAGTTCTAAAGCACAGGACTTGAAAGAAAACATTCCAAACATTCAAGAACGTATTAACCTGTTACGTACTACGGGTAACGAACAGATGCTTCGTGATATCGGTGTGATCTATACCGATGGAGGTGTTGACAAAATCAACATCCAAGCTTATCACGATCGTATCGGTCAGTATATGGACAACCCGGACAACCCTATACTGAAAGGCGTTACTAAACAAGGTAAATCCTCAGCATCTCCAACCAAAGGTGGAATGCCTTCCCCGGTCATTGGCGATCGAGCCCCAGCTCAAGATCCGTATGCTGAACTGAACTCTACCTTAACTACGCTGAGTGAACGTCTGACCAACTTAGATCATCCTGCACAGAACAAAACCTCAACAGACATGAACTGGGATGCTGCAACCGGTATCTTCACAGATATCAAAACCAGCAACGAAGGTATCCTGGCTAAAGCTACAGACATGACTACTTTACTTACTGAGTTCATTGAACTCGCTAAGAAAGGACAGTTGGTCTCTGGTGCGCCAGCTACTCCATCTCAGGCTCGTGAAGAAGAACAAGCTAAGAAATCCGTAATGGAGAAATTCCGTGGCTTAGTTCCTGCTGACATGATGGGTAAAGGGATGGAGTTCTTAATGAAGAACAACCCTCTTATCTTGGGCGGTCTGTTAGGTGGTGTTGCTTCTGGTTTCGCTACTAACCCAATAATGGCTGCTTCTATAGCTGGCTTAGGTTTAATGGGTGGTGCGTACATGCAGTGGCGCGCTCGTGGTAATAAAGGTGGCTCAGAAGCATCACAAGGCGCTGAACCAAGTGATGATGAAGATATCCTTGACGAAACCGGCGAACCGATCCTGAAGGCTTCTAAGCTGAATATGGGTGACTACATTGATATGGCTTCTAAACGGGTTATCAAGACCTGGGGAGATATTCGCGGTCCTATTATGGATACTGCGACTAAAGCTGTTATTGGTGTGCGTGACCTGGCTGGTAAGATCTTTGGGCCAGATGGTCGCGCCGTTGCACTGAAAGGTTTAACGGCTGTTCGTGATGCAGCGCTGAGTGCTTACAACTTAGCTGACCCATTAGGTCGTATGAGGTCTGTACTCGATGCAGGTAAAGAACTTGTTTATCAGCAAGACGTTTATCTGAAAACTGATTTGAAGAACCCTGTGCTGAGAGCAAGTAAGTTCAAGACAGGTGATTACTTCGTCAGAGACGAGTCTGGTAACTTCACCCCGATTAAAGGTTGGAACGAAATCAACGGAGCTGTTTATGATGAACAAGGTAATCAACTGGTTAGCGAAGATGAATACCACTCCGGTCTGGTCACTTCCACAGGTGCTGCTGTACGTAATGTGGGCACTGGTGCTGCTAACTTTGTTGGCGGAGCAGCAGGGTTGGCTAAATCTGGAGTCAATGCCTTACTATCAAAGTTTGGTTACAACCGTGAAGAACCTGGTCAAGCTGGTAATGTAAATAAGAACGCAAGCTCAGGTATCTCTTTTGGTAAGGGTGGTGTGGAACGTCGTTTAGACCGTATCTATAACTTACTCTGCCAACAGTTCGATATTCCTCCAGAAGGCTTGGACGGAGAGAATGCTTTCGCTGGTGAAAAGGTTAAGTCTGGTTTACGTCTCAACTCTCTGGCTTGGAAAGAAAAGCAGAAAGAGAAAGATGAAAAGCACAAAGTAAACGAAGCTATCATCAAAATCTCTGAGAGTATGGACGGTGGTAAAGACGAAGGTCCTGGTGAGAAGAAAGAAGGATGGTTCGACAAAATCAAAGGACTCGCAATGGGTGCCGGTAGTTTTGCGATGAACCTTCTGAAGAACCCACTTGGCGCTATCGGTGGACTTCTCTTTAGTGCTGGTAAGATGGTACTTGGTTCGGGTGCTGCGTCTTTAGGACGTTTAGCTAAAATCGGTACAGCGTTGTTCTCTGGTGTGTTGGGTGTTGCTTCTCCTATCTTCGGATTACTCAAGATGGGATTCACTAAACTTGCACAAGCATTCATGATGGGACGTGGTGCTAAAGCCGGTATGGATATGCTTGATGGACTTGACGGTCCTGAACAACGTGGACAGTCTACTAAGCGTGGACGTAAAGGTCGTGGTAAGACTGCTGGAACAAAAGGTGGGAAACCAGCTAATCCTAAAACTGGTGGACGTCTGGGTAAAGTCGGTAAGTTAGGACGTGGGTTAGTCGGTAGTCCTTGGGGTATGGCTGCTTCTATGGGCGGTGCTTACCTGTTGGGTGGATTTGACGAAGACGCTCCTGATGCAAGCTTGACTCAGTCTAGCGACGTCAGCATGGGTGAACGCGATCCAGTTACCGGACACTATCGTACTGGTGGAGATGCTGCTGTTGACGCACTCACTTCATACCTTCCTTCTGGTATGTTGGCCAAAGCTGCCGGTGATGCTGTCGCAGGTGACAAACGTTCTACTCTGGAAAACTACGGGATGTTCTGGGCTTCTGATGGTAAGTTCTTCTACCGTCGTGATGAAGTCGAAGAATACGAGGATAAACTGCAAGGTATCGATCGTACTCCTGAAGGGTATGGTGAGCTTAAGGAAGTTTCCGAAACACCTCAGCGTGCTGTACGTTTAGCCATGTATGGTGTTAGAGATCAGAAGTCTGGTCTGGGTCGTCGTGTTGGATGGTTGGAACAAGTTCTCTATCCATATGTACAGATTCGTAATAACCGTGCTTCCTTCAAAGATAACGTTCCACTTGACAAGATCCTTACTGACTTCGTTCGTACCGCAGGCGGTACTGCTGTCGATGCTGAATCTGCTAAGGCATGGTTCGTTGGTCGTTTCAAACCAATCTTCCTGACCTTTAACGCAACAGTATCCGTAGCTAACATGGGTGACCTCGAAGAGTTTGATAGAGCTTCTGGTTACATCGTGGTTCAGACTCTTGAACGTGTACAGCAGGGCATTGGTACTATCCAACCTTATCCGTATAAAGTTGACACCCGCATAGATGCGCGTATCCCTCTGATGGATGAAATGAAAACATCAGAAGTAGTTAACGCATTGATGGATAAACTGAGGAAGGAATACCCAAGTCCATCTGAAGGTGTTGTTGATACTCTCAAAGCTGAAACACCTCAACAGGTAGCTAAGAAAGAGATCAGTTCCCAGACCTTAGGTATGACCGCTGAGAACATGGCTTCTGATAAGATGGGTGCAGAAGCAGCTCGTGCTAGCCGTGAAGACATTGAACGTCGTTTCACGCAACCAGAACAAGTTAAGACAATTGACATTACCGATATGATTCCTTCTAACGGTGATGCGATTGATCCATTTACGATGACTCGTCTTGCTGTCTATGGTAACATTGATAACATGCCTTGGCGTTGTGAGGCTGTCCTGCGTTTAGAAACGTACATCCAGTCGTACATCATGGTTATCGGTGAACAGGCTCGCTTTACTGGTAAGTCAGGCCAAATGCTTGAGATCTTCCGTCCAGCGTTCCGTATTGCTAAACCACACGAAGAGATGAACTGGTTAACGTGGTTCCGAGATCGTTTCCTTCCAACCGTCATGCTTTATTGTGTACAGGTTAAGAAGTATCGTGGAACTACTCCTGAGAAAGGATGGCGTGCATTATCAGCTACCAACAAGTTTGATATCGCTAGACTGTTAGTAGATCAAATGGTGACTGTAGATAACCAGGTTAAGTCTATCTGGGAAATCGAAGCAGGTCCGTTCCCTAACTCTAAGTCCGGTACATTTAACGATCGTGCTGACAAGTACATTACTATCCTTGATTCCAAAGCGTCTGAAGCTAGATTGAAAGATCCAGAGTTAGAAGCAGAGAAGTCAAGAGGTAAACAAGGTGATGACCAAAGTCAAACCGCTAACGCTCAGCGTATGCAACAGTTGACTAAAGTCGCTATGGACAAACAGCTTGCTGGTAATACTAACACAAGTAACTTTGCTACAGGTGTTGGTGTGGGAGCTGGTGTCGGTTCAGGTTCTCCTGCTGGCGCATATCCAAATGCTACGATGTCTTTACCTGGCGGTGGAGCAGGTTCTGCTGGTCAGTTTACTGGTCAGGCCGATACTAACTTCAACCCAGAGTACTTGAAAAAGCAAGGTGATGACAAAGGTATTAAGATGTCTCCTGAGCAAGGTGAGAAGCTCATGCTTAACCACCTACTCAAAGCAGGCATTACTGATATCAAAACTATCGCGCTCGCTCTTGCGATGACTAAGAAGGAAACAGGGAACTATCAGAACACCGTTGAAGATACACGTTGGTCTGCTCCTACCCTTCTGAAGTACTTCAAGAACATACCTGATGAAGCTACGGCTCAGAAGGTTGCAGCGATGTCTCCACCTGAACGTGCAATGTGGGTATACGGTCGAAACCCGAAAGCTAAAGGCTTAGGTAACACCAAGCCTGAAGATGGTTGGGACTACCGTGGACGTGGCTTCTTCCAGTTGACTGGTAAAGCTAACTATGAACGCTTCAAGAAAGAAACCGGTATTGACGTTGTAAGTAATCCTAAGTTAGTTTCTGAGGATCCAAACGTAATGGCTGAATCAGCTGTACGTTTCCTTAAGAACTCCCCAGCGATGATGTCTATTGCTAAGACGGGTGACTTTGAAACAGCGGTACGTGGGATTAACGGCGGTAACGCGGTTCCTGCTACTGATGAACGTCGTAAGTATTATCAGGAGTATCTCAACAAGCTTCGTAACGGCGATATCAGCATGGACTCTGCTGCGGCAGAAGCGGCTGCTACCCCAGCGGCTACACCTGAACCACCTGCGGCCGCAGACCAGAACGTTCCACCTGACGCGACGGCAGTACAACCTGGTGGCCCATCTGCTCCTAAAGGAAGTAGCGAATCAGATCTTACCAAGTTGATCAATGAGTCAGAGAAAGCTACGGCTCCTTCTAATGCTGGTACTCCGCCTCCACAGGCAACAGCATCTACTCTTGATCCTGTCAACGCAGTTAGTAATGACGGTCCTACCGCACCTGTCAATACGTCTACGCCTGAGTCTAAACCAGCGGCACCTACTGGACCTGTCAACGCAACCAGTGCTTCTACACCGTCAATGGCTACGACACCTGCTCCGGCAATTCCTCAGAAAGCACCTGTGGCTCCTCAAGCACCGGCTGCTGTTCCTGAGAAAGGTAAAGCAGAACACATTCAATCTACTGATGTGGATGCAGTTAGAGAATTGCAGAGAGCTAACCAGACGCTTGCCCGTATTGCTCAGTTGCTTCAAGGCAGCCAGAAAACACCTACGGTCAGTGTATAA

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence