Protein

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Genbank accession
XAO16960.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLDGTFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTAHVRFFDGNSRERGIIYSPANDGLTTQVLNIRVQDYAAGSESTYAFSGSGLFTSPEVSAWKSISSPQILTDKVITNGKKAGDYDIYSLANNTPLSESTTAINHLRVMRNAVGAGIFHEVKDNDGITWYAGDGLDAYLWSFTWSGGLKAGHSISIGTPGGPKGYSELGTSSIALGDNDTGFKWHQDGYYFSVNNGTKTFLFSPSETTSLRKFVAGYSTNGTDLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGINNASTLLFRGNTTGSSSVDNMTISVWGNTFTNPSVGNRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGNRGVHTTGEISSGAVNALRIWNADYGAIFRRSEGSLHIIPTAYGEGKNGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFTGHGAGAGGYDIQYVQAAPIFQEIDDDAVSKYYPIVKQKFLNGKAVWSLGTEINSGTFVIHHLKEDGSQGHTSRFNQDGTVNFPDNVQVGGGEATIGRNGNIWSDIWKTFNSSGDITNLLGAVYSRVSKEGDTLTGRLTLNANSDAIVINSAATESGYLKGQKAGVDNWYVGNGGADNAISFYSFQNRSGIYVNNGGDIALNPEGSATFNFNRDRLFINGSVWTSHQAGDWGNQWRQEAPIFVDFGYVGNDSYYPIIKGKSVITNEGYVSGVDFGMRRIPNNWAQGIIRVGNQENGSDPQAIFEFHYNGNMYVPDMVKAGARLSAGGGDPAWTGPCLVIGDNDTGLVHGGDGRINMVANGVHIANWGAGYQSHPGLWDSTGAFWTEVGRAIVSHGHLVQANDSYSTFVRDVYVRSDIRVKKDLVKFENASQKLSKINGYTYMQKRGTDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTTEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1103 AA
molecular weight: 118707,72920 Da
isoelectric point:5,49641
aromaticity:0,09973
hydropathy:-0,35385

Domains

Domains [InterPro]
DC_0538
STR
1–708
DC_0538 G3DSA:6.20.80.10 IPR030392 Coil
IPR048390
ATT
450–549
IPR048390 DC_0339
IPR030392
CHP
993–1091
IPR030392
DC_1381
RBD
1005–1103
DC_1381
XAO16960.1
1 1103
Architecture
STR
ATT
STR
RBD
STR 1-449 | ATT 450-549 | STR 550-1033 | RBD 1034-1103
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO16960.1
1 1103
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,2335
Central domain 215 413 200 0,3285
C-terminal 414 1103 689 0,7611
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-413
C-terminal
414-1103

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FL23
[NCBI] 		3128057 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO16960.1 [NCBI]
Genbank nucleotide accession
PP400787.1 [NCBI]
CDS location
range 66585 -> 69896
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAAGGCGGTAGTATTGACGGGAATGTTATTCATACAGGCAATTATAACCAAACTGGCGATTATACTTTAGATGGCACCTTCACTCAGACTGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGCGATATTATTGCTGCTGGGCAGATTATGACTGAAGGCGGAGAACTTATTACAAAAAGTTCAGGTACAGCGCATGTTCGTTTTTTCGATGGCAATAGTCGCGAACGTGGAATCATTTATTCCCCGGCTAATGATGGTTTAACTACACAAGTACTTAATATCAGGGTTCAAGACTACGCCGCTGGTAGCGAAAGCACTTATGCATTTTCAGGCAGTGGCCTATTTACTTCACCTGAAGTATCAGCATGGAAATCTATTTCGTCTCCACAAATTCTGACCGACAAAGTTATTACAAACGGGAAGAAGGCAGGAGATTATGATATCTATTCATTAGCAAATAACACCCCATTATCTGAAAGCACTACTGCTATTAATCATCTTCGTGTCATGCGTAATGCCGTAGGTGCAGGTATTTTTCATGAGGTTAAAGACAATGATGGGATAACTTGGTATGCAGGTGATGGACTTGACGCTTATCTTTGGTCGTTTACATGGTCCGGTGGATTGAAAGCGGGTCATTCTATTTCTATAGGCACCCCAGGCGGCCCTAAAGGATATTCTGAATTAGGAACGTCCTCAATTGCTTTAGGAGATAATGATACTGGATTTAAATGGCATCAAGACGGATATTATTTCAGTGTTAACAATGGCACAAAAACGTTTTTATTTAGTCCAAGCGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACTAACGGAACCGATTTAACTACTCCTCCAACTGAAAATTATGCTCTTGCTACTGTAGTGACATACCACGATAATAACGCGTTTGGAGATGGTCAGACTCTTTTAGGATATTATCAAGGCGGTAATTATCATCACTATTTCCGTGGTAAGGGTACTACAAACATTAATACTCATGGCGGTTTGTTAGTTACTCCTGGTAATATTGACGTTATTGGTGGTTCTGTTAATATCGATGGTATAAATAATGCTTCTACACTGTTGTTTAGAGGTAACACAACTGGTAGTAGTTCAGTTGATAATATGACAATTTCTGTTTGGGGTAATACGTTTACTAATCCTAGTGTAGGTAATCGTAAAAATGTCATGGAAATTTCTGATGCAACTAGTTGGATGAGCTATATTCAAAGACTTACAACAGGTGAAGTAGAAATGAACGTTAACGGTTCATTTGAATCATCTGGTGTTACTGCTGGAAATAGGGGAGTTCACACAACAGGCGAAATTTCATCTGGAGCAGTGAATGCTCTTCGCATTTGGAATGCAGATTATGGAGCTATTTTTAGACGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCTTATGGTGAAGGTAAAAATGGTGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACTGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCAGCAAACGGCTATATTAAATTTACTGGTCATGGCGCAGGCGCTGGTGGTTATGATATTCAATATGTTCAAGCGGCTCCTATTTTCCAGGAAATCGATGATGATGCTGTAAGCAAATATTATCCTATTGTTAAACAGAAGTTTTTAAACGGTAAAGCCGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTCGTTATTCATCATCTGAAAGAAGATGGATCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCTGATAATGTCCAGGTTGGTGGTGGTGAAGCTACTATTGGTCGCAATGGTAACATCTGGTCTGATATCTGGAAAACGTTTAATTCTTCCGGTGATATAACCAATCTTCTTGGTGCTGTCTATAGCCGTGTTTCAAAAGAAGGCGATACGCTGACAGGTCGCTTAACTCTTAATGCAAACTCTGATGCCATCGTTATTAATAGCGCGGCAACCGAATCTGGCTATTTGAAAGGACAAAAAGCAGGCGTTGATAACTGGTATGTAGGTAATGGTGGTGCTGATAATGCCATATCGTTTTATAGTTTCCAAAATAGATCAGGCATATATGTTAATAATGGTGGTGATATTGCTTTAAACCCGGAAGGGTCTGCCACTTTTAATTTTAATAGGGACCGACTTTTTATTAATGGCTCTGTCTGGACCAGTCACCAGGCCGGCGATTGGGGAAATCAATGGCGCCAGGAAGCTCCGATATTTGTGGATTTTGGCTACGTCGGTAATGATAGTTATTATCCAATTATCAAAGGAAAATCTGTTATTACGAATGAAGGATACGTATCTGGTGTTGATTTTGGTATGCGACGCATTCCTAATAACTGGGCACAAGGTATTATTCGTGTAGGTAATCAGGAAAACGGTTCCGACCCACAAGCTATCTTCGAATTCCACTATAATGGAAACATGTACGTTCCTGACATGGTTAAAGCCGGAGCAAGATTATCGGCTGGCGGTGGTGACCCGGCGTGGACTGGACCATGTCTTGTTATTGGTGATAATGATACCGGATTAGTTCATGGTGGTGATGGGCGAATTAACATGGTTGCCAATGGTGTACATATTGCAAACTGGGGAGCAGGCTATCAATCTCATCCTGGGCTTTGGGATTCAACCGGTGCTTTTTGGACAGAAGTTGGAAGAGCTATCGTTTCTCATGGGCATCTCGTTCAGGCAAATGATAGTTATTCAACGTTTGTCCGTGATGTTTATGTCCGTTCTGATATTCGTGTTAAAAAAGACCTTGTTAAATTTGAAAATGCTTCTCAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGTGGAACGGACGAAGAAGGCAATCAGAAATGGGAACCTAACGCCGGTTTGATAGCCCAAGAAGTTCAAGCTATTTTACCAGAATTAGTTGAAGGTGACCCTGATGGCGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATAAATGAACATACTACAGAAATTGCGGAACTTAAGTCAGAGATTGAAGAGCTTAAAAAATTAGTCAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e31abb6a9f64519820a0af07e7712b493699c253b04777a238e07598b1def634
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank