Protein

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Genbank accession
AGH57206.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGLKSTFSTNEGKAEACAVDKYVNTAYDNMVIISDNIEALLEISDNLEYLTVYLGSYTTDPTERPDGTPLQDGDYYFNTLINALVYYDLAETNWFTVDPQELLDARDAAQAAQAAAETAEANALVSENNAAASELNASNSEAAALASEQAAAISEANASASETAAALSETNAAASEANALASENAAKASETAAALSETNAATSETNAANSASAALTSETNAAASETSAANSAVVAGGYAADAEAAFDNFNDLYLGAKTADPTLDNDGNPLQVGATYWNSVTNDLRYWNGVSWDIPEETAIQAANTAVAARDDAQISETNAAASAAAASTSETNAATSETNAATSEANALASEQAAALSETNAATSASNAATSEFNAAQSASDAAGSAASAAQSEANIDVAVTEAQNDIIGGSIFKGSNGEHVQNGDTVPSGTTHLRVEIGGEPTIVAMYPKSSGDVSSLSDDGATIGGTQVTFFKEIEKSVVYASNWIGLTTTNVTEKLIEMHKYAYENRLQVIYDGNFSLEVDLSKTSTSQGGTPIFVDSDTDFGGVTFSFKNASSVGGGDDDEFMRFDAQDLIDISGFVNISEFGYGSTYAPSLAAYEDAYIFINTTKDLVKRNPSDTEFRTYAVNNKVHRFGQLQYPVNYDCSDATGFKSAVLRPSKNAITIKGGIIDCTGVNNARLFVTARNNTTLDGIKCVRSDSPLNTSNNIFYFDRCCDITYKNMKPLGQNSSGTGTYGISGDGAVNLTLDNVSAVVGWGAMGTNYVNGLNVIGGYLSRVDVHFMGENIEVTRTQLKGLNIQVGIGGGYLKVKDVSVVLGKDPQRNIVDANRLIYIRPDYGSTWKGDIDIDGVSIRVAKEYDVVDTAFDMVQNVFSDNDTLVSPEIHYPFGMSLSAKNVSILVYPVGGFMGLELFNCGTVGPQQSRMMLPLKIEMESFKSITRNSEVPIVLSRTFSFIFDNDPQLHWAHTQSKSNYSGSDVEIFISDIDAIGTRPNGYISRDQQRNLLCFLSRSIDYDAHPNLPRFSVKGEKLSNLGFTWENQGDVDIDNSHIIGVWNNSNTTAIIKVTGSRCEVMKNPNGDNAYRRSFGICFENCIFIPSVGSLNDTLRTDNIVSASKCLVHKDVNLLTGAGMRTRQEMFDGFVDDPNGLVSLT
Physico‐chemical
properties
protein length:1152 AA
molecular weight: 122655,30290 Da
isoelectric point:4,35889
aromaticity:0,08160
hydropathy:-0,22387

Domains

Domains [InterPro]
DC_1362
ATT
4–182
DC_1362 DC_0194
Coil
Unmapped
102–122
Coil DC_0401
AGH57206.1
1 1152
Architecture
ATT
STR
ATT 4-182 | STR 183-1144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH57206.1
1 1152
Domain Start End Length (AA) Confidence
N-terminal 1 495 495 0,9971
Central domain 496 1140 646 0,9721
C-terminal 1141 1152 11 0,6780
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-495
Central
496-1140
C-terminal
1141-1152

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VBP32
[NCBI] 		754072 Uroviricota > Caudoviricetes > Schitoviridae > Stoningtonvirus > Stoningtonvirus VBP47
Host Vibrio parahaemolyticus RIMD 2210633
[NCBI] 		223926 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
be1fadb2939a3e42b98df16c3310e9e7b079898e4cfcf5258483c9f744cc5784
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5780
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50