Protein

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Genbank accession
WIC41545.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARHFRVKQSEIVYFSVGVDLGGYKVIYDKETQRAYSLPAGIAPGTTAISLSTAAVLVHSAGSVDLGALAVSREEYVTLPGSFDSGSTLNVKNELLTYTDGKYRWDGAFPKTVVAGSTPESTGGIGIGAWVSVGDAAFRGEANKKFKYSVKLSDYSTLQEAATAAVDGLLIDVDYTFNADESVDFSGKVLTIECKGKFIGDGMLIWNGLGAGSVIKNPHMHTKTTPYTVYRFDANGNWVTNPAQVLASVQQRLDKGYKPNVNDLDIWDNLPDNVKNQVAGATLRIMNGDNIIVEEPQATFGGYLFTLCNHILVKKPRNFIAWESGITFENHHTTAWGTGNWVTGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITSIQPYYDGIDVNADTGSPTERVDDYSLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQKNIIDNVVTYEAHKEGVFDRGTNNDITNITVVGANKDLTNLNQLTCEGSSRLRGINIHAYTTQGYAIYAPSSEISNVSCAGSGTKKLLCTYISDIQGGNINVQHSANQMTLAMQPAMGGTTNPSLLMTADCQVATPGGEASIVKLSAIQEGVRVGEFQLNRLGFKHMSIPVASSQLPESALEHNSSIGFFFGSDGALRLLAKKPDGSYVTYAL
Physico‐chemical
properties
protein length:699 AA
molecular weight: 75529,72370 Da
isoelectric point:5,64482
aromaticity:0,09156
hydropathy:-0,22060

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
91–156
IPR040775 IPR015331
WIC41545.1
1 699
Architecture
ATT
STR
ATT 1-160 | STR 161-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIC41545.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,9891
Central domain 178 587 411 0,9874
C-terminal 588 699 111 0,9268
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-587
C-terminal
588-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SP154
[NCBI] 		3050369 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIC41545.1 [NCBI]
Genbank nucleotide accession
OR050522.1 [NCBI]
CDS location
range 11464 -> 13563
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGCAAGGGTTCAACTGGAATCCTAACAAATAAACAAGCAATAGCTAGACACTTTAGAGTTAAGCAATCTGAGATTGTTTACTTTTCGGTTGGTGTAGATTTAGGTGGGTATAAAGTTATCTATGACAAGGAAACGCAAAGAGCTTATTCTCTGCCTGCTGGTATTGCTCCTGGTACTACTGCCATCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTAGGGAAGAATATGTAACCTTACCTGGTTCATTTGATTCTGGTTCTACGCTTAATGTTAAAAATGAATTACTTACTTATACAGATGGTAAGTATCGCTGGGATGGAGCATTTCCTAAAACTGTAGTTGCTGGCTCAACTCCTGAATCAACTGGTGGTATTGGCATCGGTGCGTGGGTTAGTGTTGGTGATGCGGCATTTAGAGGTGAAGCTAACAAAAAATTCAAATATTCAGTAAAGTTATCTGATTATTCTACATTACAGGAAGCAGCGACAGCAGCCGTAGATGGATTGCTTATTGATGTTGACTACACTTTTAATGCAGATGAGAGTGTAGATTTTAGCGGTAAAGTTTTAACAATTGAATGCAAAGGAAAATTCATTGGCGATGGTATGTTGATTTGGAATGGTTTGGGTGCGGGTTCAGTAATTAAGAACCCGCACATGCATACTAAAACTACTCCGTATACTGTTTACCGATTCGATGCAAACGGTAATTGGGTAACAAATCCAGCACAGGTTCTTGCCTCAGTTCAACAGAGGCTTGATAAAGGTTATAAACCTAACGTCAACGATTTAGATATTTGGGATAACCTACCTGATAACGTTAAAAATCAAGTAGCTGGTGCAACTCTTCGCATAATGAATGGTGATAATATTATTGTTGAAGAACCACAAGCTACGTTTGGTGGGTATTTGTTTACATTATGCAATCACATCCTCGTTAAGAAACCACGCAATTTTATTGCATGGGAGTCTGGTATTACATTCGAAAACCACCACACCACAGCGTGGGGTACAGGTAACTGGGTTACCGGTGGTGAAATTAAGTATGGCTCTGGTTCTGCTGTTTTATTTATCAGAAATGATGGTGGTGACGACCATGATGGCGGGGTCAGGGACCTGATATCGTATCGTGTTGGTGAGTCTGGTGTTAAGACATACCAGAATGAAATTGGAGGTCGTTCAGCCAGGAACTACCGTTTAGTGTTCGACAATATAACATCAATCCAGCCTTACTATGATGGTATTGATGTTAATGCTGACACAGGGTCGCCAACTGAACGTGTGGATGACTACTCACTCGCAGAGTATCCATGGTTCCACCTACCTACTCAACATATCATCCGTAATATCATTACTCGTGATTGTATGGGTATTGGCGCTTGGTGGGATGGTCAGAAAAATATCATTGATAATGTTGTTACTTATGAGGCCCATAAGGAAGGTGTCTTTGATAGGGGTACTAACAATGATATTACTAATATTACTGTAGTAGGTGCTAATAAGGATTTAACTAACCTAAATCAGCTTACCTGTGAGGGAAGTAGTAGACTTCGTGGTATTAACATCCATGCATATACTACTCAGGGTTATGCTATATACGCTCCGTCTTCAGAAATAAGTAATGTTTCCTGTGCTGGTTCTGGTACTAAGAAATTACTATGTACCTATATAAGCGATATTCAGGGAGGTAATATCAATGTTCAGCATAGTGCCAACCAAATGACACTTGCAATGCAACCTGCTATGGGTGGCACTACAAACCCATCTTTGCTTATGACGGCAGATTGCCAGGTTGCTACACCAGGGGGTGAGGCAAGTATTGTCAAGCTTTCGGCAATTCAGGAGGGTGTACGTGTAGGTGAGTTTCAGCTTAACCGCTTAGGCTTTAAGCATATGAGTATACCTGTTGCGTCTTCACAATTACCAGAAAGTGCTTTAGAACATAACTCATCTATAGGTTTCTTCTTCGGAAGTGATGGGGCATTGAGATTACTGGCTAAAAAACCAGATGGAAGTTATGTAACATACGCACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2d63972b7098db38e60e118e40df30fa2c50771f064a4ad7cabd462cea77a8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7081
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50