Protein

View in Explore
Genbank accession
YP_001294868.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTAQTNQPAKFLVPFAQNDSSRVELPVTTADATRASQSLGFPPSTMQPPEAGGVPPQGEDFNGALNQVARIAWWLMLGGQFPFDSAFATATQIGGYPKGAALQSADALGSWISTADNNSANPDTSTDPAGGGYVPGYQYGTTALTGLTGGTVTLTNAQAAKATVTLAGALTSALTLVVPTWLKHWTVTNNTTGAFAATIKTAAGTGIAIPQNGAPTPVVGDGANIVQVGENIAQATRLTQGVRLDQLYGTAKGFLRATSSGSTTVPPNVTTIYVSGSAGGAGGGGCATVGTPNIMSGAGGGGAGQFTEWQALTVVPGETLTYTIGGAGNGGAPNVPGGAGGNTTITGSVSGLLLSLTGGVGGSPGVGGAYSVYTAGGNGGAGAPAGGYGQDTGPQGVGANGGAGGSNPFGGGGTAVRGSQIGNTMLAGLAATGYGCGGGGCGGVYAAGNTTIPTSTGNSGGAGTPGVLLFAW
Physico‐chemical
properties
protein length:472 AA
molecular weight: 45245,36860 Da
isoelectric point:4,88101
aromaticity:0,06568
hydropathy:0,04428

Domains

Domains [InterPro]
DC_1179
STR
1–471
DC_1179
YP_001294868.1
1 472
Architecture
STR
STR 1-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage BcepNY3
[NCBI] 		2881397 Uroviricota > Caudoviricetes > Naesvirus >
Host Burkholderia cenocepacia HI2424
[NCBI] 		331272 Pseudomonadota > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia cenocepacia HI2424

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001294868.1 [NCBI]
Genbank nucleotide accession
NC_009604.1 [NCBI]
CDS location
range 21241 -> 22659
strand -
CDS
ATGACCGCACAGACCAACCAGCCCGCAAAATTCCTCGTGCCGTTCGCGCAGAACGATTCGTCACGTGTCGAGCTGCCCGTTACGACCGCCGATGCGACGCGCGCGAGCCAATCGCTCGGGTTTCCGCCTTCCACCATGCAACCACCCGAAGCTGGCGGCGTACCGCCGCAAGGCGAAGATTTCAACGGCGCGCTGAACCAGGTCGCGCGCATCGCTTGGTGGCTGATGCTCGGCGGGCAATTCCCGTTCGACAGCGCGTTCGCAACCGCGACGCAAATCGGCGGCTACCCGAAAGGCGCCGCGCTGCAAAGTGCCGACGCGCTCGGCAGCTGGATCAGCACGGCCGACAACAACAGCGCGAACCCGGACACGTCGACCGATCCGGCCGGCGGCGGCTACGTGCCGGGCTATCAGTACGGCACCACGGCACTGACCGGCCTGACGGGTGGCACCGTCACGCTCACGAACGCGCAAGCCGCCAAAGCGACGGTCACGCTCGCGGGCGCGCTCACGAGCGCGCTCACGCTTGTCGTACCGACCTGGCTGAAGCACTGGACAGTCACGAACAACACGACCGGCGCTTTCGCGGCGACGATCAAGACGGCCGCCGGCACGGGCATCGCAATTCCGCAAAACGGCGCGCCGACGCCCGTAGTCGGGGATGGCGCGAACATCGTGCAGGTAGGGGAGAACATCGCGCAAGCGACCCGGTTGACGCAAGGCGTGCGGCTAGATCAGCTGTACGGCACGGCGAAGGGTTTCCTACGCGCGACGAGCTCCGGCTCGACCACGGTGCCGCCGAACGTCACGACGATTTACGTATCGGGCAGCGCCGGCGGCGCGGGCGGCGGCGGCTGCGCCACGGTCGGCACGCCGAATATCATGTCGGGCGCGGGCGGTGGCGGCGCAGGTCAATTCACCGAGTGGCAAGCACTGACAGTCGTACCGGGCGAGACGCTTACGTACACGATCGGGGGCGCCGGTAACGGCGGCGCGCCGAACGTGCCGGGCGGCGCAGGCGGCAATACGACGATCACCGGGTCGGTGTCGGGCCTGCTACTGTCGCTCACGGGCGGCGTCGGCGGCTCGCCGGGCGTCGGCGGCGCGTATTCGGTCTATACGGCCGGCGGCAACGGCGGTGCCGGTGCGCCAGCCGGCGGCTACGGCCAGGATACGGGACCGCAAGGCGTCGGTGCAAACGGCGGTGCAGGGGGCTCTAACCCGTTCGGTGGCGGCGGCACGGCGGTGCGCGGTTCGCAGATCGGCAACACGATGCTGGCCGGCCTGGCCGCAACCGGGTATGGCTGCGGTGGCGGTGGCTGCGGTGGCGTGTACGCGGCAGGCAACACGACGATCCCGACGTCGACCGGCAATTCGGGTGGCGCTGGCACGCCGGGTGTCCTTCTCTTCGCATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9286ba60d6539e5f9d54a936877abaf51f4550b2d32ece5938d2e5e654af8a85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8576
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of phage BcepNY3, a new member of the Burkholderia phage Bcep781 family Summer,E.J., Orchard,R.C., Attenhofer,K., Coffey,A., Gill,J.J., Gonzalez,C.F. and Young,R. 2004-05 — GenBank