Protein

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Genbank accession
AUR94104.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSPSEKYPGAVDVDPDYQGGKFRDNNPSTTNNGSPLKAIDRNELLARDEAIMNDAGFEYSGVADTPQDSQLFKAYKASLGNGANLLSNHNFLTQTPDDSQPLPSATPTSYPPGYQIFSGVFANETTGITNLTYIDGRVSFSGGDLYFAVPNTGSIERLADFAASVADFDGKPRTRGVSFALVGDEYRVTVGVDALEDVAANPTPLGSVKLEQGSVATGHEAIEPLIAQTVGGVTNLQADSVTDMIAGRTIKGKVKHEVGQVWGVTGKYKVLSVPVASIDDFEPACNVHVKDFFDHSAVEQSSAINQAASYARSNGKKVLVLPSGTVEYSSDITLYDGTLHIASGLTSTELKPNNGAKILSTGSFSSFENITFSSGNSQTAIEFTAIRNAKFKCCYFFEGQIKLDDFKYVNFTDCEFGNCALIPTRSDVNEISEALKVKGCNFLFGAYIEQTQCVDTVIDDCSFLGPATRQVRARRGNHVSNFYMPIFISNSVFDAAATHGVRLEGMTFKISNTWISGGRDNNGSGLSLVDCIESSLSNVQSRYCGSYGIEMFGCKNIKSSNSHFWDNKDGGALTTSSCVDLTWNNCDFGYNSTWFGGSFVQPIGIEDPALSSVNTKVIGCEFSNMATPFSLPTAYRSCNTVNGSPIDSYFAGIQTLANAAHDIGTSIARFRDIYLINNPIVGSDERLKKDIGSIPQELCDFACRTEIKQYRFKKNESGRYHYGIVITEEFLADLESIYSVSDCSAFCKSIFTDEKGNPIEIDINEDGVPLGDIWLVRYAEWQNILLEALRRKML
Physico‐chemical
properties
protein length:796 AA
molecular weight: 86503,47550 Da
isoelectric point:4,85163
aromaticity:0,10176
hydropathy:-0,21671

Domains

Domains [InterPro]
DC_0205
STR
1–735
DC_0205 DC_2163
IPR012334
STR
300–643
IPR012334 IPR036388
IPR011050
STR
302–686
IPR011050
IPR030392
CHP
685–727
IPR030392
IPR030392
CHP
685–796
IPR030392
AUR94104.1
1 796
Architecture
STR
RBD
STR 1-735 | RBD 736-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR94104.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 301 301 0,6911
Central domain 302 648 348 0,9790
C-terminal 649 796 147 0,9855
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-301
Central
302-648
C-terminal
649-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.191.O._10N.286.52.B4
[NCBI] 		1881435 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR94104.1 [NCBI]
Genbank nucleotide accession
MG592561.1 [NCBI]
CDS location
range 28836 -> 31226
strand +
CDS
ATGGCTTACTCACCTAGCGAAAAGTATCCGGGCGCAGTCGATGTCGATCCGGATTATCAAGGCGGTAAATTCCGCGACAACAACCCATCCACAACGAATAACGGCTCTCCATTAAAAGCCATTGACCGCAACGAGTTACTTGCTCGTGACGAGGCGATCATGAATGACGCTGGTTTCGAGTACAGCGGCGTTGCTGACACGCCTCAAGATTCCCAGTTATTCAAGGCTTACAAAGCTTCGCTTGGTAATGGCGCGAACCTGCTATCAAACCACAACTTCCTGACTCAAACTCCGGACGACTCACAGCCGTTGCCTAGCGCAACGCCAACAAGTTACCCGCCTGGTTATCAAATATTCTCGGGCGTTTTTGCCAACGAAACAACCGGCATTACCAATCTAACTTACATTGATGGCCGTGTGTCGTTTAGTGGTGGTGATTTGTATTTTGCCGTGCCTAATACTGGATCAATCGAGCGATTAGCTGATTTTGCTGCATCGGTAGCTGACTTTGACGGAAAGCCACGTACTCGCGGAGTGTCTTTTGCTTTGGTTGGTGATGAGTATCGCGTAACGGTTGGTGTCGACGCGCTTGAAGATGTTGCGGCAAACCCAACACCGCTTGGATCTGTGAAGCTTGAGCAAGGCAGCGTTGCTACTGGGCATGAGGCAATAGAGCCGTTAATCGCGCAAACTGTAGGAGGTGTGACGAATTTACAGGCCGATAGCGTTACAGATATGATTGCGGGGCGCACTATCAAGGGTAAGGTTAAGCACGAAGTGGGTCAGGTTTGGGGGGTAACAGGTAAATACAAAGTTTTATCGGTGCCAGTCGCATCTATTGATGATTTTGAACCTGCATGTAACGTTCATGTTAAGGACTTCTTTGACCACTCCGCTGTAGAGCAATCTTCGGCTATTAATCAGGCCGCAAGTTACGCCAGATCAAACGGAAAGAAGGTTTTAGTCTTACCATCGGGTACTGTTGAGTATAGCTCTGACATAACACTGTACGATGGAACACTTCATATCGCATCTGGACTTACTAGCACCGAGCTCAAGCCAAATAATGGGGCCAAGATACTCTCTACGGGTTCCTTTTCTTCTTTTGAGAATATTACCTTTTCTAGTGGTAACTCTCAGACTGCAATTGAATTCACGGCAATACGAAATGCAAAGTTTAAATGCTGCTATTTTTTCGAGGGGCAAATAAAGCTTGATGATTTCAAATATGTAAACTTCACTGATTGCGAATTCGGTAACTGTGCCTTAATACCAACCCGCTCTGATGTCAATGAGATATCAGAGGCTTTGAAGGTAAAAGGGTGCAACTTTCTTTTCGGTGCTTATATAGAGCAAACTCAGTGCGTTGATACAGTCATTGATGATTGCTCGTTCTTAGGCCCTGCGACTAGACAGGTTAGAGCAAGAAGGGGTAATCATGTAAGTAACTTCTACATGCCTATCTTTATCAGTAATTCTGTGTTTGACGCGGCTGCAACTCATGGCGTTAGACTGGAAGGCATGACGTTTAAGATTTCAAATACTTGGATCTCAGGCGGAAGGGATAACAATGGTTCGGGACTTTCTCTTGTTGATTGTATTGAGTCTTCCTTGTCAAATGTTCAGTCAAGATATTGCGGAAGCTACGGCATTGAGATGTTCGGCTGCAAAAATATTAAGTCGTCAAACTCTCACTTCTGGGATAACAAGGATGGCGGGGCGCTAACAACATCATCGTGCGTAGATTTGACGTGGAATAATTGTGATTTCGGATATAATTCAACGTGGTTTGGCGGTTCTTTTGTCCAGCCGATAGGCATCGAAGATCCTGCATTATCAAGCGTTAATACAAAAGTTATTGGATGCGAATTCTCCAATATGGCAACGCCGTTTTCACTACCAACGGCGTATCGATCATGTAACACGGTTAATGGTTCTCCAATAGATAGTTACTTTGCCGGAATTCAGACGCTTGCAAATGCTGCTCACGATATAGGTACTTCGATAGCTAGGTTTAGAGATATATATCTAATCAACAACCCTATAGTTGGTTCTGATGAACGGCTTAAAAAAGACATAGGATCTATCCCTCAAGAACTTTGCGACTTTGCGTGCAGGACTGAAATTAAGCAATACAGGTTTAAAAAGAACGAATCTGGTAGATATCATTACGGAATTGTGATCACTGAAGAGTTTCTTGCTGATTTAGAAAGCATTTATAGCGTTTCAGATTGCTCTGCGTTCTGTAAAAGCATCTTTACTGACGAGAAAGGAAATCCCATCGAAATAGATATAAACGAAGATGGTGTTCCATTAGGCGACATTTGGCTTGTTAGATATGCCGAATGGCAAAACATTCTTTTAGAAGCACTAAGGAGAAAGATGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
75ca58fb5800b03e11d74cb42cbb3c44b549eab5b76d8339681b1effe45e42b3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank