Protein

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UniProt accession
A0A8S5V7J5 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MNAEMYSRIGGKALPKDNKNTVKVINFVDEDGQPVAFGQGAQGPAGPAGPAGPAGPAGPAATITKAAHVDPTTGTVKDVVNALITAGLMESV
Physico‐chemical
properties
protein length:92 AA
molecular weight: 9097,19880 Da
isoelectric point:5,60872
aromaticity:0,03261
hydropathy:-0,09783

Domains

Domains [InterPro]
DC_1037
STR
7–91
DC_1037
G3DSA:1.20.5.320
STR
38–85
G3DSA:1.20.5.320
A0A8S5V7J5
1 92
Architecture
STR
STR 7-91 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctCpP1
[NCBI] 		2825054 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG02680.1 [NCBI]
Genbank nucleotide accession
BK016213 [NCBI]
CDS location
range 5800 -> 6078
strand +
CDS
ATGAACGCTGAAATGTATTCCCGAATCGGCGGCAAGGCACTGCCAAAAGACAATAAGAACACTGTCAAGGTCATCAACTTCGTAGATGAGGATGGACAGCCTGTGGCTTTCGGCCAGGGTGCTCAGGGTCCGGCTGGCCCCGCTGGCCCCGCTGGCCCCGCTGGCCCGGCTGGCCCGGCCGCCACGATCACCAAGGCCGCCCACGTCGACCCGACCACCGGCACGGTAAAGGACGTGGTGAACGCTCTAATCACCGCTGGACTAATGGAATCCGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ddb14092ec50747e28e8e08977362ae4f2d2952f962983e90f23ede0aa82ac04
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7223
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50