Protein

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Genbank accession
XYR92636.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQSTNRPAKFLVPFAQNDSARVEIPATTADATRFSQSLGSPPLTGMPPEAGGVPPQLEDFNGAMNQIARGVWWYIGGGRFPYDSDWANNGLIGGYARGAVVPAVLGAGEWYNNTEGNTADPDAVGTGWVPGYNYGTTTLANQTGGTITLTPAQAAKRKIVVAGTLTSNLVLIVPGWVYDWNFYNATAGAFTVTVKNAATSGVVIPQNSQATPVHCDGSIVSAFSPNVGLATLPTQPAQFSQTTGRLLNVLRFDASATYTPSPLAKYVIVEAVGGGGAGGGTVAAGAGTAAAGGGGGAGAYFRTRVVVDFSSIAVTVGVGGTAAMGAAGGNGSASTFGTASAPGGSPGGLGTAANAFPTLGAAGSGSNIATGANLVVAAGSVGNYSLLLSATQGISGSGGPSVYGGGGGFPQTGSAAGNSFPGSDAVVPGAGGGGALSLSGSSARAGGTGGRGVVLVYEYA
Physico‐chemical
properties
protein length:460 AA
molecular weight: 44762,01100 Da
isoelectric point:5,83079
aromaticity:0,08261
hydropathy:0,13870

Domains

Domains [InterPro]
DC_1179
STR
1–460
DC_1179
IPR049304
STR
256–457
IPR049304
XYR92636.1
1 460
Architecture
STR
STR 1-460
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage PhiXhv-18
[NCBI] 		3447915 Viruses >
Host Xanthomonas hortorum pv. vitians
[NCBI] 		83224 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas hortorum

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR92636.1 [NCBI]
Genbank nucleotide accession
PV764600.1 [NCBI]
CDS location
range 39123 -> 40505
strand +
CDS
ATGCAATCGACCAATCGCCCGGCTAAGTTCTTGGTGCCCTTCGCCCAGAACGATAGCGCGCGCGTCGAGATCCCGGCCACGACCGCCGATGCGACGCGCTTCTCCCAGTCGCTAGGCTCTCCACCGCTGACTGGCATGCCACCCGAAGCCGGTGGCGTCCCGCCGCAGCTCGAAGACTTCAACGGTGCAATGAACCAGATCGCGCGCGGCGTCTGGTGGTATATCGGCGGCGGCCGATTCCCCTACGACAGCGACTGGGCAAACAATGGCCTCATCGGCGGCTACGCGCGCGGCGCGGTCGTGCCCGCAGTGCTGGGGGCGGGCGAGTGGTACAACAATACCGAGGGCAACACCGCCGACCCTGACGCAGTGGGTACGGGTTGGGTACCTGGCTACAACTACGGCACGACGACGCTCGCCAATCAGACTGGCGGCACAATCACGCTGACACCGGCGCAAGCGGCGAAGCGCAAGATCGTGGTCGCGGGCACTCTGACTAGCAACTTGGTGCTGATCGTACCGGGTTGGGTCTATGACTGGAACTTCTACAACGCAACAGCCGGCGCGTTCACGGTCACCGTGAAGAACGCCGCAACCAGCGGCGTTGTCATTCCGCAGAACTCGCAGGCAACACCGGTCCATTGCGACGGGTCTATCGTCTCGGCATTCAGCCCGAACGTCGGCCTGGCGACGCTCCCCACGCAGCCGGCGCAGTTCAGCCAGACCACGGGGCGGCTGTTGAACGTGCTGCGCTTCGACGCCTCCGCGACCTACACCCCGTCGCCGCTGGCTAAGTACGTCATCGTCGAGGCGGTCGGTGGCGGTGGCGCCGGTGGCGGCACCGTAGCAGCTGGCGCCGGTACCGCTGCAGCCGGGGGCGGTGGCGGCGCCGGTGCGTACTTCCGTACGCGCGTGGTGGTGGACTTTTCCTCGATCGCGGTCACTGTAGGTGTGGGTGGCACGGCGGCGATGGGCGCTGCTGGCGGCAACGGCTCTGCATCGACCTTCGGCACGGCCTCGGCACCTGGCGGCTCGCCTGGCGGCCTCGGCACGGCTGCTAACGCATTCCCGACGCTTGGCGCAGCGGGCAGCGGCTCGAACATCGCCACCGGTGCTAATCTGGTGGTGGCTGCGGGCTCGGTCGGTAACTATTCACTGCTGCTATCCGCAACGCAGGGCATCAGCGGCTCGGGCGGTCCGTCCGTGTACGGTGGCGGCGGTGGCTTCCCGCAGACCGGCTCCGCGGCTGGTAACAGCTTCCCAGGCTCGGACGCCGTCGTGCCGGGTGCCGGTGGGGGCGGCGCGTTGTCGCTGTCGGGCAGCTCGGCGCGCGCTGGCGGCACCGGGGGCCGCGGTGTGGTGCTGGTCTACGAATACGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6c932d8daf3c66a03dd1cbfa7afb58cee73bb6ccce57fb0a89e27db9611eebc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9181
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50