Protein

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Genbank accession
YP_009215715.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNATLVADGQAWQALRVRRDNLDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPASNSQESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGTSYASYAPKSFRLQYSDDGTTWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQAVSYIGWQELLLLEADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYNANEPSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDTSRSAEWRYSYVSYTHGVYPGPGTQNYPESENLWATLYLRSPEGAWNYHGNRSSYSSSNSEGIGGPTVSSSPPYNLNTTNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56520,85090 Da
isoelectric point:6,51599
aromaticity:0,14145
hydropathy:-0,46012

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
69–183
G3DSA:2.60.120.260
IPR008979
STR
80–152
IPR008979
PF22633
RBD
84–163
PF22633
YP_009215715.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009215715.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,1436
Central domain 46 244 200 0,7239
C-terminal 245 509 264 0,9805
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-244
C-terminal
245-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PAE1
[NCBI] 		1718273 Uroviricota > Caudoviricetes > Mesyanzhinovviridae > Yuavirus > Yuavirus PAE1
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009215715.1 [NCBI]
Genbank nucleotide accession
NC_028980 [NCBI]
CDS location
range 18384 -> 19913
strand +
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGACCCTGGTGGCGGATGGTCAGGCTTGGCAGGCGCTGCGCGTCCGCCGGGATAATCTTGACACGTACACCACCAGCCTCCCGGACTCCTTCACGGGTAACGGTCGGAAACAAATTCACACATTCCGCTATGATCCGCGGTCGCTGAACACGAACAATCCCGCCTCGAACAGTCAGGAGTCCTTCTGGTACACCAACTCAGGCTTCTCCGCCGGGAGCAGCTATGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCCATCGGGACCAGCTACGCGAGCTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCACCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGGCGGGACTTCGCTGTGCCCGGCACCCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACTCAGGCGGTGAGCTACATCGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGACGGGACGGTGGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGTCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGATACACGGGCTATAACGCCAACGAGCCTTCCTGGTTCAATCAACCGGGAGCCCTCCCGGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTCCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGCTCCTTCCGGTTCTGCGTCAAGGTCGGCACGAACTATGAGGGAGGCTATCTTGGTTTCATCCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCAGTCGGGGGTTCGCTCTGCCCCATCAACGACACCTCCCGGTCCGCGGAGTGGCGTTATTCATACGTGAGCTACACCCACGGCGTGTACCCAGGGCCGGGCACTCAGAACTACCCGGAAAGCGAGAACCTGTGGGCAACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCGTCCTACAGTTCGTCCAACTCCGAAGGCATAGGTGGTCCGACCGTCAGCAGCTCGCCTCCATACAACCTCAACACCACCAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGGTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ea0ea0a397a4493ed2edf36eff36e74fa3a08a457cb5c701f434afce38dae1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6568
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50