Protein

View in Explore
Genbank accession
QGZ18295.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYLGRENVVGRFVKLSDISSSFNGSNTSFTLQDSGGVNVVPQNENNLIINISGVQQNPGDAFTVSGSTITFTGPPASSDTFFGIMLGDVQTVGTPSDSTVSASSLSSSFFVKNNQTLTGVSTSASENALLVGPVTVSGTVTITSGTTLVIV
Physico‐chemical
properties
protein length:152 AA
molecular weight: 15492,94530 Da
isoelectric point:4,12255
aromaticity:0,06579
hydropathy:0,20855

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC115P
[NCBI] 		2686463 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18295.1 [NCBI]
Genbank nucleotide accession
MN698247.1 [NCBI]
CDS location
range 36982 -> 37440
strand -
CDS
ATGGCATACTTAGGTAGAGAAAATGTTGTAGGTAGATTTGTTAAGCTATCAGATATATCTAGTAGTTTTAATGGGTCGAATACTTCATTTACATTACAAGACTCTGGAGGAGTTAATGTTGTACCACAGAATGAAAATAATTTAATTATTAACATCTCGGGAGTTCAACAAAATCCGGGAGATGCATTTACTGTGTCGGGGTCAACTATTACCTTTACCGGACCACCCGCTTCATCAGATACATTTTTTGGAATTATGCTAGGTGATGTACAAACAGTAGGTACACCTTCGGACTCGACTGTATCTGCTTCTAGTTTGTCTTCTTCTTTTTTTGTAAAAAATAATCAAACACTAACTGGAGTATCAACAAGTGCTTCAGAAAATGCTTTACTTGTAGGACCAGTAACAGTAAGCGGAACAGTCACTATAACATCTGGTACAACATTGGTAATCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b4e0e80845d803946b868915348a9e666853e12d6279de1cabe8f047a65a138
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank