Protein

View in Explore
Genbank accession
AEV52230.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MAWNVTGNIQGPQGPQGDEGPEGPQGIQGPVGPAGGTGPQGEVGPAGPQGPAGEDGAGIEIAGSVATYAELPSTLGPADAGDGYLVTADGKLYIWDGAAFPANGSGVEFRGPAGPTGSQGPQGVQGPQGVKGDTGDQGPTGSTGSTGATGPRGSKWFVGAGAPSGVSGSVAGDMYLDTQTGDVYLLS
Physico‐chemical
properties
protein length:187 AA
molecular weight: 17821,97020 Da
isoelectric point:4,05003
aromaticity:0,05882
hydropathy:-0,38556

Domains

Domains [InterPro]
IPR050149
Unmapped
10–163
IPR050149
IPR008160
STR
11–56
IPR008160 IPR008160
DC_1340
STR
26–184
DC_1340
AEV52230.1
1 187
Architecture
STR
STR 11-184 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nocardia phage NBR1
[NCBI] 		1109711 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nocardia brasiliensis
[NCBI] 		37326 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEV52230.1 [NCBI]
Genbank nucleotide accession
JN116828 [NCBI]
CDS location
range 10597 -> 11160
strand +
CDS
ATGGCGTGGAACGTCACGGGCAATATCCAGGGGCCGCAAGGCCCCCAGGGCGACGAAGGACCGGAAGGCCCCCAGGGCATCCAGGGACCAGTAGGCCCGGCCGGTGGTACCGGCCCCCAGGGTGAAGTAGGACCGGCCGGTCCCCAGGGTCCGGCCGGTGAGGACGGGGCCGGTATCGAGATTGCCGGGTCCGTCGCGACGTACGCGGAGCTGCCCAGCACGCTGGGACCGGCGGACGCCGGGGACGGCTACCTGGTGACCGCCGACGGAAAGCTGTACATCTGGGACGGCGCGGCCTTTCCGGCCAACGGCTCCGGCGTGGAGTTCCGGGGACCGGCTGGTCCCACCGGCTCACAAGGCCCCCAGGGCGTCCAGGGTCCGCAAGGCGTGAAGGGCGACACGGGCGACCAGGGGCCGACGGGTAGCACCGGTTCCACCGGCGCGACCGGCCCGCGCGGGTCGAAGTGGTTCGTGGGCGCTGGCGCTCCGTCCGGTGTGAGCGGGTCCGTGGCCGGGGACATGTACCTGGACACGCAAACCGGTGACGTCTACCTGTTGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
21ab5ab05b859c0962bf94424150df76f4170d3824da9f2199d496cf35ad60ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence and characterization of the Nocardia bacteriophage NBR1 Petrovski,S. 2013-08-04 — GenBank