Protein

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Genbank accession
YP_009800814.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALYRRGTASMDADGTVHGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTAADGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIAGALDIIADLDMDNLNRIVEEIKANKSAAESAQNQAELARDSANAARDEANATKGQVQQIVDGAVGSINSAKDQAVTAVNSTKDSAVTTINQEEASAISAINAAKGDLSGYVNDAQAAASTATSAKNDAQNARNQAVSAKDAAAASAQEAKDAASSVNASNLLTKDGNLSGLTNTQAARNNLQVLYASNSNLGSTDLNTLNSTKEGRYYQTTSANATSERNYPFQEAGCLTVFKTGAGSVEACIQEYTTFSSMRRFVRSLAGTVWKEWKEIYLQGSFPTYGDINAKGRVRSEKEYPSFEWVTTKVGDDFIGKRVSIENDSGVNMFMFFMQKETTANRRVVSFARPNSTVFHFVGYNGGLPTDGNSAPSNNINFNTQPQGWRLVSGGWQNAPLAGNSYGTLFTQCMQGVAQGDSKNTGDSGLWYSQRYTNTESRMFIRNQTNNANWSNWFEFTKTAVSDERLKNVKGNLNVEGALDNINRMEFKVFSFKDDKKGKGYRRGVISQQIRQIDKEYTKEIGGYYHLDQTPMLLDGLAAIKALRARDEESKKRISDLESRISSLEDMIKKLIENK
Physico‐chemical
properties
protein length:674 AA
molecular weight: 73542,67520 Da
isoelectric point:5,80908
aromaticity:0,07715
hydropathy:-0,52062

Domains

Domains [InterPro]
DC_1216
STR
12–452
DC_1216 IPR030392
Coil
Unmapped
116–153
Coil Coil cd19958 DC_1985
IPR030392
CHP
561–615
IPR030392 Coil
YP_009800814.1
1 674
Architecture
STR
RBD
STR 12-452 | RBD 453-674
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoS_IME18
[NCBI] 		2163886 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus IME18
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009800814.1 [NCBI]
Genbank nucleotide accession
NC_047959.1 [NCBI]
CDS location
range 30206 -> 32230
strand +
CDS
ATGGCTTTATATAGACGCGGTACAGCATCAATGGATGCAGACGGAACGGTTCACGGAACCGACACAAAATGGAAAGACCAACTTGCTCTGATTCGAGTCGGTGCAACTATCGTATTCCTGGAGCAACCGATCAAGCTGGCGGTAATCAGCGACATCGTGAGCGACACAGAGTTAAAGGCTATCTCTACGGATGGTCAGACTGCCGCTGACGGAAAGTATGTGATCCTGCTTAACGACTCATTGACCGTTAACGGGCTTGCGCAAAACGTCGCTGAGACGCTTCGATACTATCAAAGCAAAGAGACTGAGATTGCTGGAGCATTGGATATTATTGCCGATCTTGATATGGATAACCTTAACCGCATCGTTGAAGAAATTAAGGCGAACAAATCAGCCGCTGAATCTGCACAGAATCAAGCGGAACTTGCTCGCGACTCAGCGAATGCAGCACGCGACGAAGCTAACGCCACTAAAGGTCAGGTACAGCAAATTGTTGACGGGGCGGTCGGTAGCATCAATTCAGCAAAAGACCAGGCTGTAACAGCTGTTAACTCCACGAAAGATTCAGCAGTAACCACAATCAATCAGGAAGAAGCTAGCGCGATCTCTGCTATCAACGCGGCGAAGGGAGATTTATCAGGTTACGTTAATGACGCTCAAGCGGCTGCTTCTACTGCAACATCTGCTAAAAACGACGCTCAGAATGCAAGAAATCAAGCAGTAAGCGCAAAAGATGCAGCGGCGGCGTCTGCTCAGGAAGCTAAGGATGCAGCAAGTAGTGTTAATGCCTCAAACCTGTTAACAAAAGATGGAAATCTTTCTGGATTAACAAATACACAAGCAGCAAGGAATAACTTGCAGGTTTTATATGCATCAAATTCTAATTTGGGATCTACCGATCTTAACACGCTTAACAGCACTAAGGAGGGTAGGTACTATCAAACAACATCGGCTAATGCTACATCAGAGCGTAACTACCCATTTCAGGAGGCTGGTTGTCTTACAGTATTTAAAACGGGCGCTGGAAGCGTAGAGGCGTGTATACAGGAGTACACCACGTTTTCAAGCATGCGTAGATTCGTTAGATCTCTTGCTGGGACGGTATGGAAGGAGTGGAAGGAGATCTACCTGCAAGGGTCATTCCCGACTTACGGCGATATTAACGCTAAAGGCCGCGTGAGATCTGAGAAGGAGTACCCTTCGTTCGAGTGGGTAACGACGAAAGTCGGAGACGATTTCATTGGCAAACGAGTCAGCATAGAGAATGACTCTGGTGTTAATATGTTCATGTTCTTCATGCAGAAAGAGACAACAGCAAATAGACGTGTCGTATCGTTCGCAAGACCTAACTCTACCGTATTCCACTTCGTCGGCTACAACGGTGGACTGCCTACAGATGGCAACAGTGCGCCATCAAATAACATAAACTTTAACACTCAGCCACAAGGCTGGAGGTTGGTATCAGGTGGGTGGCAAAATGCTCCTCTTGCTGGTAATAGCTACGGGACTTTATTCACGCAGTGTATGCAAGGTGTTGCGCAGGGTGATTCGAAAAACACGGGTGATTCAGGATTATGGTATTCGCAGCGATATACTAACACCGAATCACGCATGTTTATCAGAAATCAAACTAACAACGCAAACTGGTCCAACTGGTTCGAGTTCACTAAAACAGCGGTATCAGACGAACGCCTGAAGAATGTAAAAGGTAATTTGAATGTTGAAGGTGCGCTTGATAACATCAATCGCATGGAGTTTAAAGTATTCTCATTTAAGGACGATAAAAAAGGGAAGGGATATAGACGCGGTGTTATCTCTCAGCAGATTCGACAGATTGACAAAGAGTATACAAAGGAGATAGGCGGTTACTATCATCTAGATCAAACACCTATGCTTCTTGATGGATTGGCGGCAATAAAGGCACTTCGCGCTCGTGACGAAGAGAGCAAAAAAAGAATTTCAGATCTTGAATCAAGAATTTCCTCACTTGAGGATATGATCAAAAAACTAATAGAAAACAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25ff3e6234911ae69929e42c651b8db67fe1863307afe429f4bbb8a65dabe5cc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7189
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Enterobacteria phage IME18 Li,P., Wang,J. and Tong,Y. 2016-02-25 — GenBank