Protein

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Genbank accession
AZV01578.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNSFLKSILNTPTLTIRDDVTKLPVWKSLQVKKVEIYSPASVVSKPLATKDQTEAQVYTEALDIDVKSGKIIQPVRLRINAICPDLSTVESIMNAFNDNTSTFAITSKSILADKMAIMTLDVDQSPDMLNAAEINMEFEQVEPPGLNEFDPAFPQDSPTYGVQIQSLSDANLLDLGAIGDSISSAAKSLYNRVTSYF
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21582,30850 Da
isoelectric point:4,46279
aromaticity:0,06599
hydropathy:-0,08122

Domains

Domains [InterPro]
IPR054442
ATT
3–194
IPR054442
AZV01578.1
1 197
Architecture
ATT
ATT 3-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_fHoPae01
[NCBI] 		2500798 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV01578.1 [NCBI]
Genbank nucleotide accession
MK318076.1 [NCBI]
CDS location
range 30426 -> 31019
strand +
CDS
TTGAACTCTTTCCTCAAGTCTATTCTCAACACGCCTACTCTCACCATACGCGATGATGTCACCAAACTTCCTGTCTGGAAGAGTCTTCAAGTCAAGAAAGTGGAAATTTACTCGCCGGCTTCCGTAGTGTCGAAACCTCTGGCGACGAAAGACCAGACGGAAGCTCAAGTGTACACCGAAGCTCTGGACATTGATGTGAAGAGTGGAAAGATCATCCAACCGGTGCGACTCCGCATCAATGCTATCTGTCCGGACCTGTCCACCGTTGAAAGTATCATGAACGCTTTCAATGATAACACCTCGACTTTCGCTATCACTTCTAAGTCGATATTGGCCGATAAAATGGCCATCATGACGCTCGATGTAGATCAGTCGCCAGACATGTTGAACGCGGCTGAGATCAATATGGAATTCGAGCAGGTTGAGCCTCCAGGATTGAATGAATTCGATCCTGCATTCCCTCAAGATAGTCCGACTTATGGGGTACAGATTCAATCTCTTTCTGATGCTAATTTGCTGGATTTGGGCGCCATCGGCGATTCGATATCTTCGGCCGCAAAATCGCTATATAATCGCGTGACCAGCTACTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d97d54f919b5750780d722c1d517730df8bbfcf385814cdfc8167825aff4963d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7399
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of phage vB_PaeM_fHoPae01 infecting Pseudomonas aeruginosa Pulkkinen,E., Patinen,T., Skurnik,M. and Kiljunen,S. 2015-04 — GenBank