Protein

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Genbank accession
QQO40048.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKPFDITLSEDQKTPSEEQVFKRLKELTIEKINAICKEKINKGFTSEVLGSAHAYSLTLEDQANLQALVIAGIDSLFRCAEISNGVIGFKTYKKHTKAQLLKLSQEALKFKSDLILFYGREKERLNAVTSLEALEKFQIKEYLT
Physico‐chemical
properties
protein length:144 AA
molecular weight: 16360,75370 Da
isoelectric point:8,44950
aromaticity:0,08333
hydropathy:-0,27708

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage COL 5-PUJ
[NCBI] 		2801367 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Helicobacter pylori
[NCBI] 		210 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO40048.1 [NCBI]
Genbank nucleotide accession
MW247144.1 [NCBI]
CDS location
range 11349 -> 11783
strand +
CDS
ATGAAACCATTTGACATTACGCTAAGCGAGGATCAAAAAACACCGAGTGAAGAACAGGTTTTCAAAAGACTCAAAGAACTCACGATAGAAAAAATTAACGCTATTTGTAAAGAAAAAATCAATAAAGGCTTTACTAGCGAGGTTTTAGGGAGCGCGCATGCTTACAGTCTGACTTTAGAAGATCAAGCGAACTTACAGGCTTTAGTGATAGCGGGCATTGATTCGCTTTTTAGGTGCGCTGAAATTTCTAACGGCGTTATAGGTTTCAAAACCTACAAGAAACACACCAAAGCGCAATTATTGAAATTATCACAAGAAGCTCTAAAATTCAAAAGCGATCTGATTTTGTTTTACGGCAGAGAAAAAGAACGCCTGAACGCTGTAACAAGCCTTGAAGCGTTAGAAAAATTTCAAATTAAAGAATACTTGACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c0f48b2add4c412c0c5e42a9762e2f0aff0ea5233bb6ad5d5116733c7d38aa5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
An American lineage of Helicobacter pylori prophages found in Colombia Munoz,A.B., Trespalacios-Rangel,A.A. and Vale,F.F. 2021 33400833 GenBank