Protein

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Genbank accession
QBX06090.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYERLKRDGDWLLIFRHDSTGGVFFTSDAEARSVGTDPDVEQKFSALNSLEEFRREDGKFQFKLHYPELDVTNIWKQSSNFAAIDVGQYLTNGNLAGGEYVTEQNAKIGSWVIVEKENPGSSKYVVEQPTAALEDQLRFQVPQSRLKPNKTYTLSCWVGYEVDADHDTAAIFHARWYDGSNNDYTLGEHTAGDVFESAGNEIIVDGILWKRHYARFTTPSTLSSSSMYWYCCYTNDAGKLPTGKRWLTNFMITDSQIVKNYTGDYDATARGVRGYEPVYIESTANDWGGIEFSVSASTLADGSVDISNWYWAIGAKRSWPDATTTFPGPGINVNIAELWIYAPVGSRIGEYEVSARHIRDFSNNNIRLLATGVANGSSNLASCYLNDVSLFTPEAKQQYQVRLIIFNDDMTVKTNRKYLLSSSTERSNFINGLNGLTTEPFVILSNGSMYADSAVDAAIQQYHPIEYRGSSYFSQYSYSYCAFGTGQLGIVYDRCMFDHESDGDSVVDTAFEDKAGIGSNGYGIPLLETMTVPTDKRYLLSDYGVIDGQYLIYKARACIDRNSAIANADKMANLRFYNVVGDEVGRQNIHFYSAEKKETQEFFVQVPTGAVKFGVWSDLQPEYFDYVILTKGGMSTPSGIPHMISNINGIAAQEIVNSPITGNVVDDDSWWRAYNADSNLYAGINMPVQEIDNVQWGNYVLSGGEKCFTRTAGSSSPIEMQEVSIDPSRPYFLSLWVNAIDKQNSFLYFSVRVKNSSGDYRTLRLSDGSRTSTYINVDRVYGFPASNNQWVLLQGYILPHDWTDAQHQAFADKFNNYFGVINPEDDPTYQTSKGVGYYTTNADKSFRWNADDDKLILRYKDETAVENQVMWAFPIVTEVNVASSFEDNFTAIDFAMK
Physico‐chemical
properties
protein length:897 AA
molecular weight: 100789,43780 Da
isoelectric point:4,76086
aromaticity:0,13266
hydropathy:-0,39766

Domains

Domains [InterPro]
DC_0580
ATT
1–88
DC_0580 G3DSA:2.60.120.260 DC_0912
G3DSA:2.60.120.260
STR
89–265
G3DSA:2.60.120.260
QBX06090.1
1 897
Architecture
ATT
STR
STR
ATT 1-88 | STR 89-265 | STR 337-769 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX06090.1
1 897
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,2622
Central domain 267 480 215 0,7863
C-terminal 481 897 416 0,2593
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-480
C-terminal
481-897

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va3
[NCBI] 		2563734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX06090.1 [NCBI]
Genbank nucleotide accession
MK568540 [NCBI]
CDS location
range 85008 -> 87701
strand +
CDS
ATGTACGAAAGACTTAAACGTGACGGCGATTGGCTATTAATCTTTCGCCATGATTCAACAGGAGGTGTGTTTTTCACCTCCGATGCTGAAGCACGCAGCGTCGGGACAGATCCCGACGTTGAACAAAAATTCAGTGCGTTGAACTCACTTGAGGAATTTCGCCGTGAAGACGGCAAATTCCAATTCAAGCTTCATTACCCAGAATTAGATGTAACAAACATTTGGAAGCAAAGTAGTAACTTTGCAGCTATTGATGTAGGTCAATATCTAACTAACGGTAACTTGGCTGGTGGCGAATACGTTACTGAGCAAAACGCAAAAATAGGTTCGTGGGTTATAGTTGAAAAAGAAAACCCAGGGTCGTCAAAATACGTTGTAGAACAACCAACTGCGGCACTCGAAGATCAATTGCGATTTCAAGTGCCACAATCGCGTTTAAAACCAAACAAAACATACACATTGTCATGTTGGGTTGGGTATGAAGTAGACGCTGATCACGACACAGCAGCTATATTTCACGCTCGTTGGTATGACGGTTCCAATAATGATTATACATTAGGCGAACATACTGCGGGTGACGTGTTCGAATCAGCAGGAAACGAAATAATAGTTGACGGGATTCTTTGGAAACGTCACTATGCTCGTTTCACAACGCCTAGTACTCTTTCGTCAAGTAGCATGTACTGGTATTGTTGCTACACAAACGATGCCGGGAAATTACCAACAGGAAAACGTTGGTTGACGAACTTCATGATCACGGATTCGCAAATCGTCAAGAACTATACTGGCGATTACGATGCTACCGCTCGTGGGGTTAGGGGTTATGAACCTGTTTACATCGAAAGCACTGCAAACGATTGGGGTGGTATTGAATTCAGCGTTTCAGCTAGTACTTTAGCAGATGGTTCAGTCGATATATCAAATTGGTATTGGGCTATCGGTGCCAAACGTTCTTGGCCAGACGCGACTACGACATTCCCGGGACCGGGTATTAACGTAAATATAGCAGAATTATGGATTTATGCTCCCGTCGGTTCAAGAATCGGTGAATATGAAGTGTCGGCTAGACATATCAGAGATTTTTCAAATAATAATATCAGACTGTTAGCAACAGGTGTCGCGAACGGTAGTTCGAATCTAGCATCATGTTATTTGAATGATGTTAGTCTATTCACACCCGAAGCTAAACAACAATATCAAGTTCGTTTGATTATATTCAACGACGATATGACAGTCAAAACTAATAGAAAATATCTTCTGAGTAGTTCTACAGAACGTAGCAACTTCATCAACGGGCTGAACGGGTTAACAACAGAGCCGTTTGTTATTTTATCAAATGGGTCAATGTACGCAGATTCTGCGGTAGATGCTGCAATTCAACAGTATCACCCGATTGAGTATCGCGGTAGCTCTTACTTCAGTCAATACAGTTATAGTTACTGTGCATTCGGGACAGGGCAATTAGGTATTGTATATGATCGTTGTATGTTCGATCATGAATCTGACGGTGACAGTGTTGTTGATACTGCATTCGAAGATAAAGCAGGGATTGGTTCAAACGGGTACGGAATTCCTTTACTCGAAACAATGACTGTTCCTACTGATAAACGTTATCTTCTTTCAGATTATGGTGTAATCGACGGACAGTACTTGATTTACAAAGCTCGTGCATGTATTGATCGAAATTCAGCAATCGCGAATGCAGACAAAATGGCGAATCTTCGATTCTACAACGTAGTTGGCGATGAAGTAGGCAGACAGAATATTCATTTTTACAGTGCAGAGAAAAAAGAAACTCAAGAATTTTTCGTACAAGTACCAACAGGTGCAGTTAAATTTGGAGTTTGGTCTGACTTACAACCAGAGTACTTTGATTACGTCATATTGACTAAAGGCGGAATGTCAACCCCGAGTGGTATACCTCATATGATTTCGAACATAAACGGTATCGCTGCTCAAGAGATTGTCAATTCACCGATTACAGGTAACGTAGTTGATGACGATAGCTGGTGGCGAGCATATAACGCAGATTCAAACTTGTATGCAGGTATTAATATGCCAGTACAAGAAATTGACAACGTTCAATGGGGTAATTATGTACTTTCAGGCGGTGAAAAGTGTTTCACACGTACAGCAGGCTCATCATCTCCAATTGAAATGCAAGAAGTATCAATCGATCCATCTCGACCATACTTCTTATCGTTATGGGTTAATGCTATAGACAAGCAAAATAGCTTCTTATATTTCAGTGTACGTGTCAAGAATTCATCTGGTGACTATAGAACTCTGAGATTATCAGACGGTAGTCGAACATCTACATATATCAATGTTGACAGAGTGTACGGGTTTCCTGCTTCAAACAATCAATGGGTTTTATTGCAGGGGTATATTCTACCACATGATTGGACAGATGCACAACATCAAGCGTTTGCTGATAAGTTTAACAACTATTTCGGTGTAATAAACCCAGAAGATGATCCGACATATCAGACATCAAAGGGTGTAGGTTATTACACCACAAACGCAGACAAGTCTTTTAGATGGAATGCTGATGATGATAAGTTGATACTTCGATACAAAGATGAAACAGCCGTTGAAAATCAAGTAATGTGGGCTTTCCCAATTGTCACTGAAGTCAATGTTGCTAGTTCGTTTGAAGACAATTTCACTGCAATCGACTTTGCAATGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0dd248e39e33ca729841f51df36acf15dae2aeb15a04fb3d782b964ace4baf3a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50