Protein

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Genbank accession
QEG09202.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSSRADMIGSGPSSGLYKPSPTPTEDSSMPVYINDELLSVGGVVNGILEGGAFPPQGKMPVRWREGMMMYFIEPLEDTYVAGEFKGQKIITSAGIWLYRRKRWWKIVDDPSNIIGAVFAYRLTADGSPPSTPNPSSYPPSNWEETAPTKSDKSEWIWITMSSAYDENTDTHTWTQPTPFSAGVADGQDGLDGAPGLDGRIFEQWFYESPTNPGIPNDVYPPPSPWVNTPPANPTNAVWMTFIKVMDDGTDPVFPWSFPQKISGEDGKRGSINISVATTGSVWSNLEAYNAITNDPESNGIVQFWDTVTLYNESEQFSEQRYYAGGTGASSTWNEVALFVDGDAIVDGTIRAEKMVANTITADQIAAGTITGNEINSGTRVTIGGTSGQDVVVLDAQDANSRIWVGNTLSLSAAFRVTPDGTLYANNGFFNGTLVGNIGSNGGHLEGSAISVPTIASPKFHVDSAGNMTCTDARVTGDITGSSGTFNGDIYAENIIGGVTSSFVKPLPVFSTTVNANTWVDVATINITNTYPFDRSLSITGLENGLIRVHVQSAASGGTNYEWRLYSPSLNKTYYIISGTAKFPSGTPPVYTYISQNRFFAMIPANETVGDMVLQWRSTTANNLVVRGNSDNNDTFSYNGLYTLLKDNAEMT
Physico‐chemical
properties
protein length:651 AA
molecular weight: 70290,98400 Da
isoelectric point:4,45285
aromaticity:0,10599
hydropathy:-0,29263

Domains

Domains [InterPro]
DC_0392
STR
1–195
DC_0392 IPR057549 DC_0185
DC_1333
STR
190–454
DC_1333
QEG09202.1
1 651
Architecture
STR
STR 1-649 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEG09202.1
1 651
Domain Start End Length (AA) Confidence
N-terminal 1 418 418 0,8791
Central domain 419 617 200 0,3492
C-terminal 618 651 33 0,9960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-418
Central
419-617
C-terminal
618-651

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Phriendly
[NCBI] 		2596675 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio natriegens
[NCBI] 		691 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEG09202.1 [NCBI]
Genbank nucleotide accession
MN062185.1 [NCBI]
CDS location
range 32234 -> 34189
strand -
CDS
ATGTCAAGTAGAGCAGATATGATTGGTTCAGGCCCAAGCTCTGGACTATATAAACCCTCACCAACACCAACAGAAGACAGCTCAATGCCTGTGTACATCAACGACGAGTTGTTGTCTGTGGGTGGTGTGGTAAATGGTATCTTGGAGGGTGGGGCATTCCCACCACAAGGTAAGATGCCAGTACGTTGGAGGGAGGGTATGATGATGTACTTCATCGAACCTCTTGAAGACACTTATGTGGCAGGGGAGTTTAAAGGGCAGAAGATTATAACATCTGCTGGCATTTGGTTGTATAGACGTAAGCGTTGGTGGAAGATTGTAGATGACCCATCTAATATAATTGGTGCTGTGTTTGCATATAGACTTACCGCAGATGGGTCTCCACCAAGTACACCAAACCCTTCATCATATCCTCCAAGCAATTGGGAGGAGACTGCACCAACCAAGTCTGATAAATCTGAGTGGATTTGGATTACGATGTCTTCTGCTTATGATGAGAACACAGACACACATACTTGGACTCAGCCAACACCTTTTAGTGCTGGTGTTGCTGACGGTCAAGATGGTTTAGATGGAGCTCCGGGATTAGATGGTAGAATATTCGAACAATGGTTTTATGAATCTCCAACCAATCCGGGAATACCTAATGATGTATACCCTCCACCATCACCTTGGGTAAACACACCACCAGCAAACCCAACAAATGCTGTATGGATGACGTTCATTAAGGTTATGGATGATGGAACTGACCCAGTATTTCCTTGGTCATTTCCTCAAAAAATAAGTGGTGAAGACGGTAAACGTGGCTCTATTAACATTTCTGTAGCTACAACTGGAAGTGTGTGGAGTAATCTGGAGGCATACAATGCTATAACTAATGACCCAGAATCAAATGGCATTGTACAGTTCTGGGATACTGTAACCTTGTACAATGAATCTGAGCAATTCTCTGAGCAAAGATATTATGCCGGAGGTACTGGAGCTTCATCTACTTGGAATGAGGTGGCTTTGTTTGTTGATGGTGATGCAATTGTGGATGGCACAATACGTGCAGAGAAGATGGTTGCTAATACTATCACAGCAGACCAGATTGCTGCTGGCACTATCACAGGTAATGAGATTAACTCAGGTACTAGGGTAACCATTGGTGGCACATCAGGTCAGGATGTTGTTGTCTTGGATGCACAAGACGCTAACAGTAGGATTTGGGTGGGTAATACTTTATCCCTATCTGCTGCATTTAGGGTCACCCCTGATGGAACTTTGTATGCCAACAACGGTTTCTTTAACGGAACCTTGGTAGGTAATATAGGCTCAAATGGGGGCCACCTAGAGGGTTCAGCTATAAGTGTGCCTACTATTGCAAGCCCTAAGTTCCATGTTGATAGTGCTGGTAATATGACCTGTACTGACGCTAGGGTTACAGGAGATATTACAGGCTCTAGTGGCACTTTTAATGGCGATATCTATGCAGAGAATATCATTGGCGGTGTAACTTCTAGTTTTGTTAAGCCGCTTCCTGTATTCTCAACCACAGTAAATGCAAACACATGGGTGGATGTTGCAACTATAAACATTACTAACACTTATCCTTTTGATAGGTCTCTATCTATTACTGGATTAGAGAATGGCTTAATTCGTGTGCATGTTCAGTCTGCCGCTAGTGGTGGTACTAACTATGAATGGAGACTATATTCACCATCATTAAATAAAACATACTACATTATAAGCGGTACTGCTAAATTTCCATCAGGCACACCACCTGTATATACATACATTAGTCAGAACAGATTCTTTGCTATGATTCCGGCTAATGAGACTGTAGGTGATATGGTGTTGCAGTGGAGAAGTACTACCGCTAATAACCTAGTTGTTCGTGGTAACAGTGATAACAATGACACTTTCTCTTATAATGGCTTGTATACTCTATTAAAAGATAATGCAGAAATGACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f72dc979be8f903c5b6e959b14acf04930f84551330bd39e507f05b095c0093f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6670
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Phage Phriendly Clark,J., Awah,A., Moreland,R., Liu,M., Gill,J.J. and Ramsey,J. 2019 31582448 GenBank