Protein

View in Explore
Genbank accession
XGT88996.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYNLIEIRRYTSATERLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGDLDARGRRIVNVADAKDPGDAINLGQVSRWNESALNSKNAAAASQQAAAASQQAAKTSENNSKVSENNAKTSENNAHQWAQRAEDSPVQGSEFSAYHYSRKASKSAAAASTSEGNAKTSENNAKTSENNAKTSENNAATSAATAITEAAKLTNMNDFATTIRAVNTATYSVSWKGDGMFDGSVTAGKGLTVSTGDVVINQGTGNWVFLNGHTAVGVNYTSNGIRTANRNNQRVDDYTWEATGQYFAKVVHVYQAGSQTVPEFFYEFRNNGTVQLGQISAIGGDESTFQHNVNIQWGGRGARYQENGDIVSIQGDASIFREFGGTLSGAINWLKNVNIQDVWLGSQEWWGSLRQNGNSRSDWALGGGSVCTGVTQDMTAGERNAWIDGIFHRKVWVRHGSGQQRIIASV
Physico‐chemical
properties
protein length:535 AA
molecular weight: 57974,77410 Da
isoelectric point:5,97687
aromaticity:0,08411
hydropathy:-0,51421

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–531
DC_0657
XGT88996.1
1 535
Architecture
ATT
STR
ATT 1-131 | STR 132-531 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_GP-5
[NCBI] 		3146127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGT88996.1 [NCBI]
Genbank nucleotide accession
PP454755.1 [NCBI]
CDS location
range 33414 -> 35021
strand +
CDS
ATGGCTACAACTATTAAGACCGTGATGACTTACCCGCTGGATGGCTCCACTACGGACTTCAATATTCCGTTTGAGTATCTGGCGCGTAAGTTCGTCAGAGTGACCCTTATCGGTGTTGACCGAAAGGAACTCATCTTGAATCAAGACTATCGTTTTGCGACTAAGACCACAATCTCCACAACGAGAGCATTGGGGCCAGCGGACGGTTATAACCTTATCGAGATTCGTCGGTACACCTCAGCGACTGAACGTCTGGTTGACTTTACGGATGGCTCAATCCTCCGTGCGTATGACCTGAACATCTCGCAGGTGCAGACCCTCCACGTTGCTGAGGAAGCGCGTGACCTTACCGCTGATACGATTGGCGTTAACAACGATGGTGACTTGGATGCTCGTGGTCGTCGTATCGTGAACGTTGCGGACGCTAAAGACCCCGGTGACGCAATCAACTTAGGTCAAGTCTCTCGGTGGAATGAGTCGGCACTGAACTCTAAGAATGCTGCTGCTGCATCTCAACAGGCCGCTGCTGCATCTCAACAGGCCGCTAAGACCTCAGAGAACAACTCGAAGGTATCTGAGAACAACGCAAAGACCTCCGAGAACAACGCGCATCAATGGGCGCAGCGTGCAGAGGACTCTCCGGTTCAGGGTAGCGAGTTCTCTGCGTATCACTACTCACGGAAGGCCTCCAAGAGTGCTGCCGCCGCAAGTACGTCTGAGGGGAATGCAAAGACCTCAGAGAACAACGCAAAGACCTCAGAGAACAACGCAAAGACCTCAGAGAACAACGCCGCTACCAGTGCTGCAACCGCTATCACTGAGGCCGCCAAGTTGACAAACATGAATGATTTTGCGACTACCATCAGGGCTGTTAACACAGCTACCTACTCGGTTTCGTGGAAAGGTGATGGTATGTTTGACGGCTCGGTCACTGCTGGTAAAGGACTTACAGTGTCTACTGGTGACGTTGTCATTAACCAAGGAACGGGTAACTGGGTTTTCCTTAATGGGCACACAGCAGTTGGCGTTAACTACACATCCAATGGCATTCGTACAGCTAACCGAAACAATCAGCGTGTGGATGACTACACATGGGAAGCGACAGGGCAGTATTTTGCCAAAGTAGTCCATGTATACCAAGCAGGCAGTCAAACAGTTCCAGAGTTCTTCTACGAGTTCCGAAACAACGGTACTGTGCAGTTGGGCCAAATTAGTGCGATTGGTGGTGATGAATCCACCTTCCAGCACAACGTTAATATCCAGTGGGGTGGACGTGGTGCCCGTTATCAGGAAAATGGTGACATTGTGTCTATACAGGGGGATGCATCCATCTTCCGAGAATTTGGAGGAACACTTAGTGGTGCAATTAACTGGCTTAAGAATGTTAACATTCAGGACGTTTGGTTAGGTAGTCAGGAGTGGTGGGGTTCTTTACGTCAAAACGGGAATAGCCGTTCTGACTGGGCATTGGGTGGAGGCTCAGTGTGTACTGGTGTGACTCAGGATATGACCGCAGGTGAGCGTAATGCTTGGATTGATGGTATATTCCATCGTAAGGTCTGGGTTCGTCATGGCTCTGGGCAGCAGCGCATCATTGCTTCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d292ed79cd27a3cf258aaaeb6e40da8cb5102e325827b73167fb60363671aa5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6316
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of four novel bacteriophages targeting multi-drug resistant Klebsiella pneumoniae strains of sequence type 147 and 307 Ponsecchi,G., Olimpieri,T., Poerio,N., Antonelli,A., Coppi,M., Di Lallo,G., Gentile,M., Paccagnini,E., Lupetti,P., Lubello,C., Rossolini,G.M., Fraziano,M. and D'Andrea,M.M. 2024 — GenBank