Protein
View in Explore- Genbank accession
- WIC90016.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TFTSP
- Protein sequence
-
MADLLVGYDPSQPAGQRFAPEVRAEIAEVAPDNIDNGSVTTAKLANDAVTGDKLAPGAVGSTEIATGGVGTANLANDAVTTAKLANDSVTGAKAGLGIATAHDAAGNETSIDFVPITAAQYGALGTPDPNTVYFISDT
- Physico‐chemical
properties -
protein length: 138 AA molecular weight: 13673,82320 Da isoelectric point: 4,05003 aromaticity: 0,04348 hydropathy: 0,01014
Domains
Domains [InterPro]
DC_1086
STR
1–138
STR
1–138
IPR056923
RBD
112–136
RBD
112–136
1
138
Architecture
STR 1-138
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
138
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 136 | 136 | 0,9921 |
| Central domain | 137 | 136 | 1 | 0,0613 |
| C-terminal | 137 | 138 | 1 | 0,8586 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (1 AA) is still below minimum (10 AA). Sequence may be too short.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (1 AA) is still below minimum (10 AA). Sequence may be too short.
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-136
1-136
Central
137-136
137-136
C-terminal
137-138
137-138
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Gordonia phage Sisko [NCBI] |
3035391 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WIC90016.1
[NCBI]
Genbank nucleotide accession
OQ938590.1
[NCBI]
CDS location
range 30884 -> 31300
strand +
strand +
CDS
ATGGCAGACCTCCTCGTGGGCTACGACCCGAGCCAACCGGCGGGCCAGCGTTTCGCGCCCGAGGTCCGCGCCGAGATCGCCGAGGTCGCCCCGGACAATATCGACAACGGCTCAGTCACCACAGCCAAGCTCGCCAACGACGCGGTGACCGGCGACAAGCTCGCGCCCGGTGCGGTCGGCTCGACCGAGATCGCCACCGGCGGCGTGGGCACAGCCAACCTCGCCAACGACGCGGTGACCACGGCCAAGCTCGCCAACGACTCGGTGACCGGGGCCAAGGCCGGTCTCGGTATCGCCACCGCGCACGACGCGGCGGGCAATGAGACTTCCATCGACTTCGTCCCGATCACCGCCGCTCAGTACGGCGCGCTCGGCACCCCCGACCCCAACACCGTCTACTTCATCAGCGACACATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
aacf4a28d4037d8d134c56ea6fead832bb181fd4ac7d4d374c8c46d9cdff2f0c
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50