Protein

View in Explore
Genbank accession
QWY17798.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTTKVIFTFHNPDGSPQAGKEFSVRLTRPGMNDADDCIVLPESYDMTTDAQGQFTMDLESATSAYRVSVVDDDSFEDDPCNRTSFTFYVPDSPTPVHVQELILLPPPTSLPWDEEAMNKITQAVVDAREARDEAEGHADRAEEQVVLAKAEVVKAKGEVTKAQAEVAKAAQQVDLAKVEVGKAAASASAAKVSETNAANSAAGAAASATAATNQANRAKTEADRAEALANQVAEKVEGGNLPALVGMNETFTYEGGEDHYNWTRTGPVSVSQHTGFIRVSKTDASSNRAFIRKSVEFPDDHWITYFRVKTQTGTAAQNNSAQIRFLAADGKDYTVYFNINANGLVEPNTIHMQGSEGGARNAATMFTGLNTEAWMDMAVKFDAVNRHIELFRRMPNGTWQKGGGRLMVDTIKPAIIEISSMPVAPNGWWMDVDFITVCRPNLICYGDSIAAGQNEYGVTRGTADYHNNRNWAGTWFGQSSLYATNRNNLVLVQGVEGRRTWQYLDSLGEIENSGVKVVFLHASTNDHKDATMTMAKRTSDTQAIVDRLHAVGAQVVLFNAMQGTKAFNDSLAEGVIKLKAYTDQWWSEELHKVTGLGQVLDIARVVGKDGYFDPAIAADDGLHLTAASAKKIADKLGQFYSNSTSINGLAPLESPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLTMRNKTGAQLAAGGVRSGYYYVPGDSSNPLPGNVYAFMHHMSYDNNKGWELWNHCYTDRVYMRYSNNQGVWQTPVEMVTANWMERNSFMTPRVTAFNRLPVASAAGYEGVVPLQAGSSGAWRNLNAGSAGIGLLGAATVENALNYIGGTPKTMTSLRSYSDANAIPNECGFYGVGVAPWANLPPGVTSINPVGSTIYHQVYDASTSTQIFIPRTSDICYFRRKAAGVWSPWVRYLTDKQLVGTTTNSSTGEPNGAIMESGTTANGWYIRFADGTQMAGARTEPGLPAGANVIQLPASFVSGFNTAVTCNWIPSSNWPTNAGQGVRGAYLNSGSTVSFATAQAAGANDTIMIMAVGRWY
Physico‐chemical
properties
protein length:1056 AA
molecular weight: 114266,12850 Da
isoelectric point:5,42150
aromaticity:0,09564
hydropathy:-0,30038

Domains

Domains [InterPro]
DC_0123
ATT
1–157
DC_0123 IPR051532 DC_0857
DC_1375
STR
115–753
DC_1375 cd19958
Coil
Unmapped
124–179
Coil Coil IPR036514
SSF52266
STR
439–637
SSF52266
cd00229
ENZ
442–639
cd00229
IPR013830
ENZ
444–627
IPR013830
QWY17798.1
1 1056
Architecture
ATT
STR
ATT 1-157 | STR 158-1056
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY17798.1
1 1056
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9914
Central domain 237 487 252 0,4743
C-terminal 488 1056 568 0,8077
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-487
C-terminal
488-1056

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae-PA152
[NCBI] 		2851029 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY17798.1 [NCBI]
Genbank nucleotide accession
MZ322319.1 [NCBI]
CDS location
range 58422 -> 61592
strand -
CDS
ATGACCACCAAGGTGATCTTCACCTTCCATAACCCGGATGGCAGTCCACAGGCCGGAAAAGAGTTTTCTGTCCGACTGACCCGTCCGGGTATGAACGATGCGGATGACTGCATCGTCCTACCTGAAAGCTATGACATGACCACGGATGCTCAGGGTCAGTTCACGATGGACCTGGAGTCGGCTACTTCGGCATACCGGGTTTCCGTAGTGGATGACGACTCGTTCGAGGATGATCCGTGCAATCGCACGTCGTTCACCTTCTACGTGCCGGATTCTCCCACTCCTGTTCATGTGCAGGAACTGATCCTGCTGCCTCCGCCTACGTCTCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACTCAGGCTGTCGTAGATGCTCGTGAGGCTCGTGACGAAGCCGAGGGCCATGCTGATCGTGCTGAAGAGCAGGTAGTCCTGGCCAAGGCTGAGGTCGTCAAGGCCAAGGGCGAGGTGACCAAGGCACAGGCTGAAGTAGCTAAAGCTGCTCAGCAGGTCGATCTTGCGAAGGTTGAAGTAGGTAAGGCAGCAGCCTCTGCTTCTGCGGCCAAGGTCAGCGAAACCAATGCCGCGAATTCCGCTGCTGGTGCTGCTGCCTCGGCGACTGCTGCGACCAACCAAGCCAACCGTGCGAAGACGGAAGCTGATCGTGCTGAAGCACTGGCAAACCAAGTTGCTGAAAAGGTGGAAGGTGGCAACCTACCTGCACTGGTAGGGATGAACGAAACCTTCACCTACGAAGGTGGTGAGGACCACTACAACTGGACTCGTACCGGTCCGGTGTCTGTCTCTCAGCACACTGGTTTCATTCGTGTTTCCAAGACCGATGCATCCAGCAACCGAGCTTTCATCCGCAAGTCTGTCGAGTTCCCGGATGACCACTGGATCACCTACTTCCGGGTGAAAACCCAGACGGGTACTGCTGCACAGAACAACTCGGCCCAGATCCGTTTCCTTGCTGCTGATGGCAAGGACTACACGGTCTACTTCAACATCAATGCCAATGGTTTGGTGGAACCGAACACCATCCATATGCAAGGTAGCGAAGGTGGGGCACGCAACGCTGCAACCATGTTCACTGGCTTGAACACCGAAGCATGGATGGACATGGCAGTGAAGTTCGACGCCGTGAACCGCCACATTGAACTGTTCCGTCGGATGCCCAATGGCACCTGGCAGAAGGGTGGCGGTCGCTTGATGGTGGACACGATCAAGCCTGCGATCATCGAGATCTCTTCCATGCCTGTCGCACCCAATGGTTGGTGGATGGACGTGGACTTCATCACGGTTTGCCGACCGAACCTCATCTGCTACGGCGACAGCATTGCTGCCGGTCAGAACGAGTACGGGGTAACCCGAGGTACTGCGGATTACCACAACAACCGTAACTGGGCAGGAACCTGGTTTGGCCAGTCCAGCCTGTATGCCACCAACCGGAACAACTTGGTTCTGGTGCAAGGTGTAGAAGGCCGACGTACCTGGCAGTATCTGGATAGCCTGGGGGAGATCGAGAACTCCGGTGTGAAAGTGGTGTTCCTGCATGCAAGCACGAACGACCACAAAGACGCCACCATGACCATGGCCAAGCGTACTTCGGACACTCAAGCCATCGTTGACCGGCTGCACGCTGTAGGTGCTCAGGTGGTTCTATTCAACGCCATGCAAGGCACCAAGGCATTCAACGATTCGTTGGCCGAGGGGGTGATCAAGCTCAAGGCGTACACCGACCAATGGTGGTCTGAGGAACTGCATAAGGTCACTGGTTTGGGGCAGGTTCTGGACATCGCCCGTGTGGTAGGCAAGGACGGTTACTTCGACCCTGCTATCGCTGCGGATGACGGTCTGCACCTGACTGCTGCATCTGCGAAGAAGATCGCCGACAAGCTGGGGCAGTTCTACTCGAACTCCACTTCCATCAATGGTTTGGCTCCGCTGGAGAGTCCTGCGTTCACGGGTATTCCTACCGTTCCAACGCAGACTCCTTTCCTGCCTTACGGCAAGCAGATCGCCAACACCGAATACGTCATTACCTTCATTCAGGACTGGACCAGTAACTACGGTTACGGTGACCTGACGATGCGTAACAAGACTGGTGCTCAGCTGGCAGCTGGTGGCGTTCGTAGCGGTTATTACTATGTTCCTGGGGATTCTTCTAACCCCTTGCCGGGAAATGTCTATGCATTCATGCATCACATGTCCTACGACAATAACAAGGGCTGGGAACTCTGGAACCATTGCTACACCGACCGCGTGTATATGCGCTACTCGAACAACCAGGGTGTCTGGCAAACTCCAGTGGAGATGGTTACCGCGAATTGGATGGAGCGTAATAGCTTCATGACTCCTCGGGTTACCGCATTCAACCGTCTGCCTGTAGCTTCTGCTGCCGGTTATGAAGGGGTTGTCCCCCTGCAAGCTGGATCCAGTGGTGCATGGCGTAACTTGAACGCCGGTTCTGCCGGGATCGGGTTGCTAGGTGCTGCTACGGTCGAGAATGCGTTGAACTACATCGGTGGTACTCCGAAGACGATGACCAGTCTGCGGTCCTACAGCGATGCCAACGCCATTCCGAACGAGTGCGGTTTCTACGGTGTCGGGGTTGCTCCTTGGGCGAACCTGCCTCCGGGCGTAACTTCCATTAACCCGGTGGGTTCTACCATCTACCACCAGGTTTATGACGCCAGCACTTCTACGCAGATCTTCATTCCGCGTACTTCGGATATCTGCTATTTCCGTCGCAAGGCTGCGGGTGTCTGGAGTCCCTGGGTACGCTATCTGACCGATAAGCAGTTGGTCGGGACTACTACCAACAGCAGCACCGGGGAACCGAACGGTGCCATCATGGAAAGCGGCACAACTGCCAATGGTTGGTACATCCGTTTCGCTGATGGGACTCAAATGGCAGGTGCAAGAACTGAACCTGGTCTGCCTGCTGGCGCCAATGTGATACAGTTGCCTGCCTCTTTCGTGTCTGGCTTCAATACCGCAGTAACCTGCAACTGGATCCCCTCTTCCAACTGGCCTACCAACGCTGGCCAAGGGGTTCGGGGGGCTTACCTGAATAGTGGTAGCACTGTTTCTTTTGCTACTGCACAGGCAGCCGGGGCTAACGACACTATCATGATCATGGCCGTAGGGAGATGGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
329d5797eac5fa002c79f87f803aedaf6070d561b2b30fb01d1e63f34e7096db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6604
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of N4-like Pseudomonas phage vB_Pae-PA152 Srichaisupakit,A. 2021-11-22 — GenBank