Protein

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Genbank accession
QPI17640.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDTGEHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGSYLTLAEDPGFRAFAQVGLSSAFAIGDSLAHGTYIYNSGLGHEESIARQGTGGTIIQSSDMGIVRPGGVPVGEAVARAYEMLGFPRGTINVPINAGDLNYWDPNWQAPIGSAGRGHDHFYVCNSNIRSYIGKKKEIPANVNHIYSSPTFPYLYTCRGSASNMGSQSVNTVYIQDWYNITPTKVIWYVLNLRYSNGNMVVSGNPFTGSDILISPSNFTIKGVSLPNSGYKFINQNAFGNLGYRSDMEYIGNNAAYTGVFGDTTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGAGKQWYVDTNSNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDINPSYPAAGNYYQPLATVWLGLPNAHSTIILTTEVIMGNINTAGMPVRTYGGSAWQVQGRRQQSYTAGDGIFHQILTLPPGYLVPYHSTTAYSYTQEWASRPDSMIFRRNGYIYTIKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64135,90030 Da
isoelectric point:6,66917
aromaticity:0,11973
hydropathy:-0,17690

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
QPI17640.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI17640.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3404
Central domain 11 228 219 0,8913
C-terminal 229 593 364 0,6499
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-228
C-terminal
229-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage MSP1
[NCBI] 		2801538 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17640.1 [NCBI]
Genbank nucleotide accession
MT989367 [NCBI]
CDS location
range 85111 -> 86892
strand +
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATACTGGTGAGCACTATTCTCCAAATACTAATAGTATCTTTCACTCAGATATGCCTTTCGTCCTGGTTGATGGGACTTATGAAGCGGCTCTAGGTAATGCAGGTAATGGATACTTTGTTACTCAGATGCCTTGGGATATTATAAATATTAAATCCAATGATCCGGGTAGAGTTATATTAACTGCTATTGAGATTAATGGTACCCATAGAGGATTCCTCAATGGTACTCAATCTCAGGTTGGTAGCTATTTAACTCTTGCGGAGGATCCAGGTTTTAGAGCATTCGCTCAAGTAGGCTTAAGTTCTGCTTTTGCAATCGGCGATAGTCTAGCACACGGTACTTATATTTATAATAGTGGATTAGGACATGAAGAGTCTATAGCCAGACAAGGTACTGGCGGAACAATTATACAATCATCAGATATGGGTATAGTGAGACCTGGGGGTGTTCCGGTAGGGGAAGCGGTTGCCAGAGCATATGAAATGCTTGGATTTCCTAGAGGAACTATTAATGTACCTATAAATGCCGGAGATTTAAACTATTGGGATCCTAACTGGCAGGCACCTATTGGTTCTGCCGGTAGAGGTCATGATCATTTCTATGTATGTAACTCAAATATTCGCAGCTATATAGGTAAGAAAAAAGAAATACCGGCAAATGTAAATCATATCTATTCCTCCCCTACTTTTCCTTATCTATACACCTGTAGAGGTTCGGCTAGTAATATGGGTTCTCAGTCTGTTAACACTGTTTATATTCAGGACTGGTATAATATTACACCTACTAAGGTTATCTGGTATGTTTTAAACCTACGTTACTCTAATGGTAATATGGTGGTTTCTGGTAATCCATTTACTGGTTCTGATATCCTTATCTCTCCATCTAACTTTACTATTAAAGGGGTAAGTTTACCTAACTCTGGTTATAAATTTATTAATCAGAATGCCTTTGGTAATCTAGGTTATCGTTCAGATATGGAATATATAGGTAATAATGCTGCGTATACTGGGGTTTTTGGGGATACTACTGCGCGATGTGAATTCATTGGCTCTAGCAATGGTGGATTATGGTCTCCAGTTAACTATGGGGGTGCTGCCTCTCAGATTAGTTTATATAAGTTTGGTGCAGGTAAACAATGGTATGTAGATACTAATAGTAATTCCATAGGAAATGAACATGGTCCAGTTTGGAGTCCCTCTACAGTTCCACTACGATTATTCCCTGGTAACGTTGCTAGTACTTATGTTGGGGATGATATAAATCCATCTTACCCAGCGGCAGGCAACTATTATCAGCCTTTAGCTACTGTATGGTTGGGTCTGCCTAATGCTCATTCTACTATTATACTAACCACTGAAGTTATTATGGGTAATATTAATACTGCTGGAATGCCTGTGCGTACTTACGGAGGTAGTGCTTGGCAGGTACAAGGTAGACGTCAACAAAGTTATACTGCTGGTGATGGTATATTTCATCAAATACTAACATTGCCTCCAGGATATCTAGTACCATATCATAGTACTACAGCATATAGTTATACACAGGAATGGGCGAGCCGACCAGATAGTATGATTTTTAGAAGGAATGGTTATATTTATACTATTAAAAACCTTGGTAATGGCAACGTTGAGTTGGGTGTTATTATCCATGCTGCAGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19667ee3de71cdac2fcce84b609928ab9221931773e556284459693fdec3f377
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50