Protein

View in Explore
Genbank accession
UKH48602.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQREIPLATNTAEQDISGNELLLNVYPRATSGGKYPFNLINTPGLAFFCELPTYPVKALHENGNRAFAVTPTKFYEIFRNGTFKELGDVDMRGRVSIEDNGSQVVMVDGFKGYYFDINTEEVKRIDADGFYPASTVTYQDGYFIFDRKGTGQFFISELLDVAFDPLDFATAEGQPDPLVAVLSDHREVFMFGTQTIEVWYNSGASDFPFERNQGAFIEKGCAARYTVAKQNNTIYFVGSDLMVYQMAGYTPVRISTHIVEQTLKGVDLTDAFAYTYQDEGHLFYVLTIPERNLTWCYDISTGAWHIRQSYQFGRHQSNNAIFYGSKTLVGDFQNGRIYQMASDYYTDDGEPVVREFVLPTVNNGREFLTVDSLELDMTSGIGLLTGQGEDPIARLEFSKDNGKTWSNCKFARIGRMGEYLTRVKWNRLGVARQFIFRIRISDPVPIDVGGAFIEVR
Physico‐chemical
properties
protein length:456 AA
molecular weight: 51598,33410 Da
isoelectric point:4,92342
aromaticity:0,13816
hydropathy:-0,27368

Domains

Domains [InterPro]
DC_1784
STR
4–456
DC_1784
IPR021098
STR
84–453
IPR021098
SSF63825
STR
108–343
SSF63825
UKH48602.1
1 456
Architecture
STR
STR 4-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKH48602.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 444 444 0,8323
Central domain 445 445 2 0,0027
C-terminal 446 456 10 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-444
Central
445-445
C-terminal
446-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_FGH
[NCBI] 		2911663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKH48602.1 [NCBI]
Genbank nucleotide accession
OL762410 [NCBI]
CDS location
range 16881 -> 18251
strand +
CDS
ATGCAGAGAGAGATCCCTTTAGCGACTAACACCGCTGAGCAAGACATTTCAGGTAATGAGCTGCTGCTTAACGTCTACCCAAGGGCGACAAGCGGCGGCAAGTATCCTTTCAACCTGATCAACACTCCGGGGCTCGCATTCTTTTGTGAGCTTCCTACTTACCCGGTCAAAGCTCTTCATGAAAATGGCAACCGCGCCTTTGCTGTAACGCCTACTAAGTTTTATGAGATCTTCCGTAATGGGACATTCAAAGAGCTTGGTGATGTTGATATGCGTGGCCGTGTGTCGATTGAAGACAACGGCTCTCAAGTGGTCATGGTTGATGGGTTCAAGGGTTATTACTTCGACATTAACACCGAGGAAGTGAAGCGGATTGATGCTGATGGGTTTTACCCGGCCTCAACTGTCACCTATCAGGACGGCTATTTTATCTTTGATAGAAAGGGAACCGGGCAGTTCTTTATTTCTGAGTTGCTGGATGTTGCCTTTGACCCTCTTGATTTTGCTACAGCAGAAGGGCAACCCGATCCGCTTGTTGCCGTTCTTAGTGATCACCGTGAAGTGTTTATGTTTGGTACTCAGACTATTGAGGTCTGGTACAACTCAGGGGCTTCAGATTTCCCGTTTGAGCGCAATCAAGGTGCATTCATTGAAAAGGGTTGCGCGGCGCGTTACACAGTAGCCAAGCAGAACAACACCATTTACTTTGTTGGCTCTGATCTGATGGTTTATCAGATGGCAGGCTACACCCCTGTCAGAATAAGCACTCACATTGTAGAGCAGACATTGAAGGGCGTTGATCTTACCGATGCCTTTGCTTACACCTATCAGGATGAGGGCCACTTGTTTTATGTGCTCACAATTCCTGAGAGAAACCTTACTTGGTGTTATGACATTTCAACCGGGGCTTGGCACATTCGCCAGAGCTACCAGTTTGGCCGGCACCAATCAAACAATGCCATTTTCTACGGCTCAAAAACTCTGGTTGGCGACTTCCAGAATGGCCGTATTTATCAGATGGCAAGCGACTATTACACGGATGATGGTGAGCCCGTTGTTCGTGAGTTCGTTCTTCCTACCGTCAACAATGGCCGTGAGTTCTTAACGGTGGATAGCCTTGAGCTTGATATGACCTCTGGCATAGGTCTTTTAACTGGTCAGGGTGAAGACCCAATTGCGCGGCTTGAGTTTTCAAAGGATAACGGCAAAACATGGAGCAACTGCAAGTTTGCTCGCATTGGTCGCATGGGTGAGTACCTTACCCGTGTTAAGTGGAATCGCTTAGGCGTGGCCCGTCAATTCATCTTCAGGATCAGGATCTCTGACCCGGTTCCTATTGATGTTGGTGGCGCGTTCATTGAGGTGCGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f96912ad413c12787a132e93fbb7af3008eb3f01c1e029338d5f4ecb0bdb5056
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete sequence of phage Podoviridae sp. vB_ValP_FGH Wang,P. and Wang,X. 2012-12-15 — GenBank