Protein

View in Explore

Genbank accession

WBF04766.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,75

Evidence RBPdetect2

Probability 0,96

Protein sequence

MANGQTPVQGSIMSMPVLADWTGQEYVPVVDETGNNKRVLLEDLKGRDAYEVAKEAGYTGTLQEWLASLKGEKGDKGDKGDNGADGKSNYDLAVEQGYQGDLASWLLTQKGADGNDGKDGVDGMLPDFTPVAVETDHVTEADFLTLMTAAVNGAKPVDVTSKMLMIDHEGAVGESSLGGWTIYPTESGRYVYVFGRNALGNGQQGNYSAYMPDGGSPQFLSWSASEKGEQGIQGIDGKPGISVVPKGTTPSQVALPVASESNAGWMFTNDGSVTASDKGTLYVSDGTQWVIQGNILGPQGLKGDKGDKGEKGDTGTAGKNAVGMQIVGIVDKEEDLPPVADFTAGDTYVVGTHLWTKVGTEWVDIGDFTGPDGLSAYQVAKANGFVGTEAEWLSSLKGADGIGLKIIGSLPSKDNLPEVGEKSGDAYIINSVMWVWDTVQWSPVGQVGPQGKSAYQSALDTGYVGTEAAWIASLKGNKGDKGDKGDQGEKGEKGDNAAAVMLRGEKADEASLPSTGNTVSDAWLVGGNMFVWTGTAWFDAGPIQGPQGIKGDKGDKGDTGDTGKSAFEVAVAGGFSGTQTQWLASLVGNAVKAKGTLADFANLAGVVSPEAGWAYNITGGASAGHQFIYDGATWVDMGDVRGAKGEKGDQGIKGDTGDAGVDGATAYEIAQGAGFTGTEAEWLKSLIGPGLVAKGHVTDSADLLNVTNPVAGWVYNVLSGDDAGHQFIYNGSDWIDMGNVRGDQGIQGDKGDKGDKGDTGATGNAVNYRGTVATSDLLPSSGNQVSDAYFVGVNLWVWNGTTWIDNGSFQGPQGLKGDKGDKGDKGDTGTTGKSAYQSAVDSGFSGTESAWVTSLKGTTGKSAYQSAVDGGYAGTEAQWVASLKGTNGTNGTSLVPKGTVADLTALNAVANPVAGWLYNMTSTGHAYVYSGSAWVDQGDWRGLQGIQGLTGDQGIKGDTGDGYRYKGTVATTGDLPTTGQVKGDTYFVGTNMKVWNGTGWDDGGNFQGPQGIQGEKGDIGAGIKILGKKDTEEDLPATADAAGDGYMVGTNFWVWDGTAFVNVGAIQGPKGDQGLRGIQGLKGDKGDKGDKGDTGDKGTAWVVLARPPAAADGRIGDYYLNSSTLQFFVKTSDVLWGPLGYLGGGNVYDGPQDGKAYARKDGTWVLVDVLEAPDDGKQYVRKGKAWVSFDHYDMPLITVTAGAVDASKGNAYKLDATVSTTIAFSNLPANRVQTLVLTMMGKGGNLTWPAALKWSNAEAPTLGTTLTNIVVYWDGTNLTGSVGQTV

Physico‐chemical properties

protein length:	1286 AA
molecular weight:	133303,20650 Da
isoelectric point:	4,50650
aromaticity:	0,08631
hydropathy:	-0,37037

Domains

Domains [InterPro]

DC_2121
ATT
3–85

DC_2121 DC_1340 DC_1340 DC_1340 DC_1340 DC_0114

IPR050149
Unmapped
61–763

IPR050149 DC_1065 SSF58046 G3DSA:6.20.230.10

DC_1967
ATT
73–178

DC_1967 DC_0915 DC_1340 DC_1065 G3DSA:6.20.230.10

WBF04766.1

1 1286

Architecture

ATT

STR

ATT

STR

RBD

ATT

RBD

ATT 3-178 | STR 181-290 | ATT 291-403 | STR 404-964 | RBD 965-1143 | ATT 1144-1190 | RBD 1191-1286

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_2121	ATT	DC_2121	3	85	Novel HMM	DC_2121	N-terminal	Low	Positional only	48 proteins / 48 hits
IPR050149	Unmapped	-	61	763	InterPro	Collagen superfamily	-	-	-	-
DC_1967	ATT	DC_1967	73	178	Novel HMM	DC_1967	N-terminal	Low	Positional only	47 proteins / 47 hits
DC_1340	STR	DC_1340	181	317	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_0915	ATT	DC_0915	291	403	Novel HMM	DC_0915	N-terminal	Low	Positional only	48 proteins / 48 hits
DC_1340	STR	DC_1340	378	469	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	454	589	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	584	685	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1065	STR	DC_1065	668	765	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_1340	STR	DC_1340	740	882	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1065	STR	DC_1065	848	964	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_0114	RBD	DC_0114	941	1286	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits
SSF58046	ATT	SSF58046	1144	1168	Merged direct domain	SSF58046	N-terminal	Low	Positional only	12 proteins / 12 hits
G3DSA:6.20.230.10	ATT	G3DSA:6.20.230.10	1145	1168	Merged direct domain	G3DSA:6.20.230.10	N-terminal	Low	Positional only	46 proteins / 46 hits
G3DSA:6.20.230.10	ATT	G3DSA:6.20.230.10	1169	1190	Merged direct domain	G3DSA:6.20.230.10	N-terminal	Low	Positional only	46 proteins / 46 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage vB_Ea277G [NCBI]	3016906	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Erwinia amylovora [NCBI]	552	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

WBF04766.1 [NCBI]

Genbank nucleotide accession

OP991903.1 [NCBI]

CDS location

range 65228 -> 69088
strand -

CDS

ATGGCTAACGGTCAAACCCCTGTACAGGGTAGCATCATGTCGATGCCGGTACTCGCCGACTGGACGGGACAGGAGTACGTCCCGGTCGTTGATGAGACTGGCAACAACAAACGTGTTCTTCTCGAAGACCTGAAAGGGCGTGACGCATACGAGGTAGCCAAGGAAGCGGGCTACACGGGCACTCTCCAAGAGTGGCTGGCGTCCCTGAAAGGTGAGAAGGGCGATAAAGGCGATAAGGGCGATAACGGAGCCGACGGTAAGTCGAACTACGACCTCGCCGTGGAACAGGGTTATCAGGGCGACCTGGCATCCTGGCTGCTCACGCAAAAAGGCGCGGACGGTAACGACGGTAAAGACGGTGTTGATGGCATGTTGCCAGACTTCACTCCGGTGGCTGTTGAAACCGACCACGTCACCGAAGCTGACTTCCTGACATTGATGACCGCTGCGGTCAACGGTGCGAAGCCAGTAGATGTCACCAGCAAGATGCTGATGATTGACCATGAAGGCGCGGTGGGTGAAAGCTCACTGGGCGGTTGGACCATTTACCCTACCGAATCCGGTCGTTACGTTTACGTCTTCGGTCGTAATGCGCTGGGTAACGGTCAGCAAGGTAACTATTCCGCCTACATGCCGGATGGCGGTAGTCCGCAATTCCTGTCCTGGTCTGCTTCTGAAAAGGGCGAACAAGGTATCCAGGGTATTGACGGTAAGCCGGGTATCTCCGTCGTACCGAAAGGTACCACCCCTTCTCAGGTAGCATTGCCAGTTGCAAGTGAATCTAACGCAGGTTGGATGTTCACGAACGACGGTAGCGTAACTGCTTCTGATAAAGGTACGCTCTACGTCTCCGACGGTACTCAGTGGGTAATCCAGGGGAACATCCTGGGTCCACAGGGCCTGAAGGGAGACAAAGGGGATAAAGGCGAGAAAGGTGATACCGGTACAGCCGGTAAGAACGCCGTCGGGATGCAGATTGTCGGCATCGTCGACAAAGAAGAAGACCTGCCTCCGGTCGCAGACTTCACCGCGGGTGATACCTACGTAGTAGGCACACACCTCTGGACGAAAGTCGGCACTGAGTGGGTCGACATCGGCGACTTCACTGGCCCTGATGGTCTGTCTGCGTACCAGGTTGCGAAAGCGAACGGGTTCGTGGGTACCGAAGCTGAATGGCTGTCAAGCCTGAAAGGTGCTGACGGCATCGGTCTGAAAATCATCGGTTCTCTGCCGTCAAAGGATAACCTCCCAGAAGTGGGCGAGAAGTCTGGTGATGCTTACATCATCAACTCCGTCATGTGGGTGTGGGATACCGTTCAGTGGTCCCCGGTAGGTCAGGTTGGCCCGCAAGGTAAATCTGCTTACCAGTCTGCGCTCGACACCGGCTATGTCGGTACTGAAGCGGCCTGGATTGCCTCCCTGAAAGGGAACAAAGGCGATAAAGGCGATAAAGGCGACCAGGGTGAAAAAGGTGAGAAGGGCGATAACGCTGCCGCAGTCATGCTGCGTGGCGAGAAGGCCGACGAAGCATCACTGCCTTCTACCGGTAACACCGTCTCTGACGCGTGGCTGGTTGGCGGTAACATGTTCGTCTGGACCGGTACTGCCTGGTTCGATGCAGGTCCTATCCAGGGTCCTCAGGGCATCAAGGGCGATAAGGGTGATAAAGGCGACACCGGTGATACCGGTAAGTCTGCATTCGAAGTTGCCGTTGCTGGCGGTTTCTCCGGTACCCAAACCCAATGGCTGGCGTCTCTCGTAGGCAATGCTGTTAAGGCGAAAGGTACACTGGCTGACTTCGCTAACCTGGCGGGTGTGGTTTCTCCGGAAGCCGGTTGGGCCTACAACATCACTGGCGGCGCATCTGCTGGCCATCAGTTCATCTACGACGGGGCAACCTGGGTAGACATGGGCGATGTTCGCGGAGCCAAAGGCGAGAAAGGTGACCAAGGTATTAAAGGTGATACCGGCGATGCCGGTGTAGACGGCGCAACCGCTTACGAAATCGCCCAAGGTGCTGGCTTTACTGGTACCGAAGCTGAATGGCTGAAGTCCTTGATTGGTCCGGGTCTGGTAGCGAAAGGTCACGTAACCGATTCTGCTGACCTGTTGAACGTCACTAACCCAGTTGCGGGTTGGGTCTACAATGTTCTCTCCGGCGACGATGCCGGTCACCAATTCATCTACAATGGTTCCGATTGGATTGACATGGGCAACGTCCGTGGCGACCAGGGTATCCAGGGTGACAAAGGTGATAAAGGGGACAAGGGCGACACGGGTGCAACCGGTAACGCGGTTAACTACCGTGGTACTGTAGCCACCTCTGACCTGCTGCCTTCCAGCGGTAACCAGGTTTCCGATGCGTACTTCGTGGGTGTAAACCTGTGGGTATGGAACGGTACCACCTGGATTGACAACGGTAGCTTCCAAGGCCCACAAGGTCTGAAGGGAGACAAAGGGGATAAAGGCGACAAAGGTGATACTGGTACTACCGGTAAATCTGCGTACCAGTCCGCCGTTGATTCCGGGTTCTCTGGCACTGAATCTGCGTGGGTAACCTCGCTGAAAGGTACCACTGGTAAGTCCGCTTATCAGTCTGCGGTTGACGGCGGTTACGCTGGCACCGAAGCACAGTGGGTTGCTTCCCTGAAAGGGACCAACGGTACTAACGGTACGTCACTGGTTCCGAAAGGAACTGTTGCTGACCTGACCGCACTGAACGCAGTGGCTAACCCGGTTGCTGGCTGGCTGTACAACATGACCTCTACGGGTCACGCGTACGTCTACAGCGGTAGCGCATGGGTCGACCAGGGCGATTGGCGTGGCCTCCAGGGCATCCAAGGTCTGACTGGTGACCAAGGTATTAAAGGTGATACCGGCGACGGCTATCGCTATAAAGGTACCGTGGCAACGACTGGTGACCTGCCAACCACCGGCCAAGTGAAAGGTGACACCTACTTCGTAGGCACCAACATGAAGGTCTGGAACGGCACTGGCTGGGATGACGGCGGTAACTTCCAGGGTCCGCAAGGTATCCAGGGTGAAAAAGGTGACATTGGTGCGGGCATCAAGATTCTCGGTAAGAAAGACACCGAAGAAGACTTGCCAGCAACTGCCGATGCAGCCGGTGACGGTTACATGGTAGGCACCAACTTCTGGGTGTGGGACGGCACGGCATTCGTGAACGTCGGCGCAATCCAGGGACCGAAAGGTGACCAAGGTCTCCGCGGTATCCAGGGCCTGAAAGGTGATAAAGGTGACAAGGGTGATAAGGGTGACACCGGTGACAAAGGCACCGCGTGGGTTGTCCTGGCACGTCCCCCAGCTGCGGCTGATGGTCGTATCGGTGACTACTACCTGAACTCCTCTACTCTCCAGTTCTTCGTGAAAACCTCTGACGTTCTGTGGGGCCCTCTGGGTTACCTCGGCGGCGGTAACGTGTACGACGGTCCTCAGGACGGTAAAGCGTACGCCCGTAAAGACGGTACATGGGTTCTCGTTGACGTTCTGGAAGCCCCAGACGACGGTAAGCAGTACGTACGTAAAGGTAAAGCGTGGGTTAGCTTCGACCATTACGACATGCCGCTGATTACGGTCACTGCGGGTGCGGTAGATGCGAGCAAAGGTAACGCCTATAAGCTCGATGCCACCGTGAGCACCACGATTGCGTTCAGTAACCTCCCAGCCAACCGCGTGCAGACTCTGGTCCTCACGATGATGGGCAAAGGTGGTAACCTGACGTGGCCAGCAGCACTCAAGTGGTCGAATGCGGAAGCACCGACTCTGGGTACTACGCTGACCAACATCGTGGTTTACTGGGACGGCACGAACCTGACCGGCTCTGTTGGTCAGACCGTGTAA

Genome Context

Tertiary structure

PDB ID

127cabeec3417330621c82c9531c2f79e182ee6daf014cb5fabe1c870108cee8

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6465

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete Genome Sequences of Erwinia Amylovora phage vB_Ea277G	Renteria-Soto,D.L., Romo-Chacon,A., Rios-Velasco,C., Olivas,G.I. and Berlanga-Reyes,D.I.	2023-07-17	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature