Protein

View in Explore
Genbank accession
XSB41185.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSALYEKSQLTKILISSLPSTKETMDSATFLDLSCTIKEIQFTGGQKQDIDVTTLCSTEQENINGLPSPSEISLSGNFYNNPAQDALRDAYDNDTTYGFQIIFPSGNGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVPIDSVLKLTTDLPSSLSVAVGAAISMAVVAAGGKPPYAYTWKKAGSTVSGQTSDTFNKATAVSGDAGDYTCVVTDSSSPVKTVTSAACTLTIS
Physico‐chemical
properties
protein length:234 AA
molecular weight: 24612,31120 Da
isoelectric point:4,98031
aromaticity:0,07692
hydropathy:-0,07564

Domains

Domains [InterPro]
G3DSA:4.10.410.40
STR
6–142
G3DSA:4.10.410.40 IPR007110
DC_0400
STR
8–234
DC_0400
IPR013783
STR
150–230
IPR013783
IPR036179
RBD
153–233
IPR036179
IPR003599
STR
154–234
IPR003599
cd00096
STR
174–217
cd00096
XSB41185.1
1 234
Architecture
STR
STR 6-234
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage mEpX1
[NCBI] 		1147153 Uroviricota > Caudoviricetes > Hendrixvirinae > Cuauhtlivirus mEpX1 >
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB41185.1 [NCBI]
Genbank nucleotide accession
PV340543.1 [NCBI]
CDS location
range 26178 -> 26882
strand +
CDS
ATGTCTGCACTTTATGAAAAATCGCAGCTGACGAAGATCCTTATTTCCTCCCTGCCGTCCACCAAAGAAACGATGGATTCCGCCACCTTTCTCGATCTGAGTTGCACCATCAAAGAAATTCAGTTCACTGGTGGCCAGAAGCAGGATATCGACGTAACAACACTTTGCTCTACCGAGCAGGAGAACATCAACGGCCTGCCTTCTCCGTCAGAAATCTCTCTGTCCGGCAACTTCTACAATAATCCAGCGCAGGACGCCTTGCGTGATGCGTATGACAACGACACCACTTACGGCTTCCAGATCATCTTCCCGTCAGGTAATGGTTTTAAGTTCCTGGCCGAAGTTCGCCAGCATACCTGGTCATCTGGTACCAATGGTGTTGTGGCAGCTACATTCTCACTGCGCCTTAAAGGCAAGCCTGTCCCGATTGACTCTGTACTTAAACTGACCACTGATCTTCCTTCCTCACTGTCTGTAGCGGTGGGGGCTGCGATCAGCATGGCTGTAGTAGCTGCCGGTGGTAAGCCTCCGTATGCCTACACCTGGAAGAAGGCAGGTAGCACCGTCAGCGGGCAGACATCCGATACCTTTAATAAAGCCACCGCAGTTTCAGGTGATGCAGGTGATTACACCTGTGTGGTTACGGATTCTTCTTCTCCGGTCAAAACGGTTACCTCAGCTGCCTGCACCCTTACTATCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
49f79fc8849ceca4d723770db3d714ff3b30cc5ff513e4f0080e06039de29fb3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9281
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank